Pairwise Alignments

Query, 650 a.a., lytic transglycosylase from Cupriavidus basilensis FW507-4G11

Subject, 676 a.a., Soluble lytic murein transglycosylase (EC 4.2.2.n1) from Variovorax sp. SCN45

 Score =  464 bits (1193), Expect = e-135
 Identities = 276/645 (42%), Positives = 372/645 (57%), Gaps = 57/645 (8%)

Query: 39  SQSPAIPGNP--DDAFVALREAARKNDVARTDAISATLVDYPISSYVEYFRIKPQMFDAS 96
           SQ PA   N   DD  + +++A ++ D AR  A+      + +  +  Y+ +K ++ +AS
Sbjct: 34  SQQPAAAQNNTNDDVLIQMKQAFQRGDKARLSALLPQARGHALEPWAAYWELKARLSEAS 93

Query: 97  GLARIDAPDDQVRAFLQRYKGEAIADRMRNDWLLVLGKKRDWANFDAEYPQFVLKDDTQV 156
                    ++V+ F  RY G    DR+RNDWLL+ G++RDW NF A    F + DD QV
Sbjct: 94  --------PNEVQDFFARYAGTYQEDRLRNDWLLLTGQRRDWDNFSASIAGFRMGDDAQV 145

Query: 157 ECYALLSRALKG----QNVAADARAALSDPRYYGEGCVDLIGYLAQSRQIEPSDVAFQAR 212
            CYA L   L+     Q  A + R      +   +GC+     +  +R + P+D   +AR
Sbjct: 146 RCYATLVDTLRSGTATQAQADEVRRNWFAQKDADDGCLTASDRMVAARLMTPADAWKKAR 205

Query: 213 QALEQNYVTLA-GRIAAAAPDA-------------------------RGDSNTLATVVKM 246
            A+E N    A G +  AAPDA                         R +   LA ++K+
Sbjct: 206 LAMEANRPQAARGAVTIAAPDALPLFEELNASSAKFLTGRAFVAAKSRKELVVLA-LIKV 264

Query: 247 ARSDPSQAAAYLSANAGS-LSRDEQGAGWGVVGQYAAKKLAPEAAGYYRRQMDLGGNQWL 305
           A +DP  AA+ L +  G  LS +E+   WG +G+ AA KL+P+A GY+    ++  N  L
Sbjct: 265 AIADPDLAASQLDSKWGPMLSAEERNWLWGTIGRQAAGKLSPQAGGYFA---NVTKNSDL 321

Query: 306 SDETQEWRVRAALRQGDWKQVRQAVELMRPELRAKDPAWTYWYGRALK---ADNRGAEAE 362
           SD+   WRVRAALR G WK+V  A+  M  E    DP W YW  RAL    ++ R A+A 
Sbjct: 322 SDDMLGWRVRAALRAGQWKEVAPAINAMS-ESAQLDPTWVYWKARALANNGSEERRAQAR 380

Query: 363 KQFQSIAGQFNFYGQLASEELGNRIVLPAR-TQVSDAEVNAMRTRPGFLRAQKFYDLSLR 421
           + +QSIAG   FY  LA EELG R V+P R   ++  E    R  P   R      + LR
Sbjct: 381 ELYQSIAGSRGFYEMLALEELGQRTVVPTRPAPLTPEEKATARANPSLARGLYAIAIGLR 440

Query: 422 FEGNREWNWELR-----GMTDRQLLAAADYARRIELLDRAVNTADRTQAEHDFSLRFLMP 476
            EG REWN+        GM DR LLAAAD+A + E+ DR +NT++RT+   D   RF MP
Sbjct: 441 PEGTREWNYATNLHDKGGMDDRALLAAADFACQREVWDRCINTSERTKGVVDVDQRFPMP 500

Query: 477 YRDIMQRATDDVGLDMAWAYGLVRQESRFIMNARSSAGAHGLMQVMPATAKWVARKIGMT 536
           + D + R + D+GLD A+ YGL+RQESRFIM+ARS  GA GLMQVMPATA+W ARKIG+T
Sbjct: 501 FHDTVLRKSQDIGLDPAYVYGLIRQESRFIMDARSGVGASGLMQVMPATARWTARKIGLT 560

Query: 537 DFSPAMMSDPSINIQLGTNYMSMVLTDLDSSWTLASAAYNAGPGRPKNWRSSLPRQVEGA 596
           DFSP  ++D   NI +GTNY+ + L D D S  LA+AAYNAGPGRP+NWR+     ++ A
Sbjct: 561 DFSPNQINDRETNITIGTNYLKLALDDFDGSMALAAAAYNAGPGRPRNWRNG--PVIDAA 618

Query: 597 IFAETIPFSETRTYVKNVLSNATYYAALMSGRPQSLKDRLGVVSP 641
           I+AE +PFSETR YVK VL+N T YAA++SGRPQSLK+RLG V P
Sbjct: 619 IWAENVPFSETRDYVKKVLANTTNYAAIISGRPQSLKERLGRVGP 663