Pairwise Alignments

Query, 230 a.a., hypothetical protein from Cupriavidus basilensis FW507-4G11

Subject, 331 a.a., TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 2/158 (1%)

Query: 46  FDSALRDFAKAAQQGNRLAQYNYAMMLLRGEGTPVRQQEALIWLHRAAENDMTQAQFTFG 105
           +  A+  + K A+Q + LAQYN   M   G G      +AL W  +AA      +Q    
Sbjct: 120 YAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERLA 179

Query: 106 EMYEHGELVPRSLESANQWYRRAAEGGHVQAQVELATNYFTGRGLARDYGKAFEWYTRAA 165
            MY +G+   ++L  A  WY+++A      +Q ++   Y+ G+G+ +DY +A  W+ +AA
Sbjct: 180 YMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAA 239

Query: 166 TAGDGGAQYIVASYYERGEPGVVEKDIEQAKIWYARAA 203
             GD  A   +   Y+ G    VE++   A  W+ ++A
Sbjct: 240 DQGDDDAYNSIGWMYKCGHG--VEQNYSLALEWFHKSA 275



 Score = 76.3 bits (186), Expect = 7e-19
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 2/172 (1%)

Query: 49  ALRDFAKAAQQGNRLAQYNYAMMLLRGEGTPVRQQEALIWLHRAAENDMTQAQFTFGEMY 108
           AL  F +AA QG+  +Q   A M   G+G       A +W  ++A  + + +Q+  G  Y
Sbjct: 159 ALYWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCY 218

Query: 109 EHGELVPRSLESANQWYRRAAEGGHVQAQVELATNYFTGRGLARDYGKAFEWYTRAATAG 168
             G+ + +  + A  W+R+AA+ G   A   +   Y  G G+ ++Y  A EW+ ++A   
Sbjct: 219 YIGKGIKQDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECN 278

Query: 169 DGGAQYIVASYYERGEPGVVEKDIEQAKIWYARAAAHGDPGALAKLRSLIEQ 220
           +    Y +   Y  G      +D++QA  W+ +A   G      ++R L  Q
Sbjct: 279 NSSGWYNLGCMYRDGHG--TAQDLQQALYWFKKAQPTGKWNVDEEIRKLEAQ 328



 Score = 67.0 bits (162), Expect = 4e-16
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 55  KAAQQGNRLAQYNYAMMLLRGEGTPVRQQE---ALIWLHRAAENDMTQAQFTFGEMYEHG 111
           +AA+QG+  AQY    + LR + TP   ++   AL W  +AA+     A  T G + E  
Sbjct: 57  QAAEQGHCEAQY---WLGLRYKDTPTDMKDNTLALFWSEKAAQQGHRHAFNTLGWVQEGE 113

Query: 112 ELVPRSLESANQWYRRAAEGGHVQAQVELATNYFTGRGLARDYGKAFEWYTRAATAGDGG 171
             +      A  WYR+ AE  H  AQ  L   Y +G G+ ++  +A  W+ +AA  G   
Sbjct: 114 TGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGHCA 173

Query: 172 AQYIVASYYERGEPGVVEKDIEQAKIWYARAA 203
           +Q  +A  Y  G+     K++  A +WY ++A
Sbjct: 174 SQERLAYMYGNGKG--CRKNLSLAALWYKKSA 203



 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 27/95 (28%), Positives = 42/95 (44%)

Query: 46  FDSALRDFAKAAQQGNRLAQYNYAMMLLRGEGTPVRQQEALIWLHRAAENDMTQAQFTFG 105
           +  A+  F KAA QG+  A  +   M   G G       AL W H++AE + +   +  G
Sbjct: 228 YQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLG 287

Query: 106 EMYEHGELVPRSLESANQWYRRAAEGGHVQAQVEL 140
            MY  G    + L+ A  W+++A   G      E+
Sbjct: 288 CMYRDGHGTAQDLQQALYWFKKAQPTGKWNVDEEI 322



 Score = 46.6 bits (109), Expect = 6e-10
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 5/144 (3%)

Query: 85  ALIWLHRAAENDMTQAQFTFGEMYEHGELVPRSLES--ANQWYRRAAEGGHVQAQVELAT 142
           +L  L   A++  ++AQ+  G +Y + E +  S E   +  W ++AAE GH +AQ  L  
Sbjct: 14  SLAQLTELAQSGNSEAQYILGRLY-NDERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGL 72

Query: 143 NYFTGRGLARDYGKAFEWYTRAATAGDGGAQYIVASYYERGEPGVVEKDIEQAKIWYARA 202
            Y       +D   A  W  +AA  G   A +    + + GE G+   D  QA  WY + 
Sbjct: 73  RYKDTPTDMKDNTLALFWSEKAAQQGHRHA-FNTLGWVQEGETGMA-PDYAQAVAWYRKG 130

Query: 203 AAHGDPGALAKLRSLIEQGLKAKQ 226
           A      A   L  +   G   +Q
Sbjct: 131 AEQSHNLAQYNLGRMYHSGTGVEQ 154