Pairwise Alignments

Query, 230 a.a., hypothetical protein from Cupriavidus basilensis FW507-4G11

Subject, 509 a.a., Putative secreted protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 59/157 (37%), Positives = 80/157 (50%), Gaps = 1/157 (0%)

Query: 49  ALRDFAKAAQQGNRLAQYNYAMMLLRGEGTPVRQQEALIWLHRAAENDMTQAQFTFGEMY 108
           AL  + +AA QG   AQ    +M ++GEG     Q+AL W  +AA   +  AQ   G M 
Sbjct: 299 ALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS 358

Query: 109 EHGELVPRSLESANQWYRRAAEGGHVQAQVELATNYFTGRGLARDYGKAFEWYTRAATAG 168
             G  V +S   A  WYR+AA+    +AQ +L   Y TGRG+  +   A +WY +AA  G
Sbjct: 359 AFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQG 418

Query: 169 DGGAQYIVASYYERGEPGVVEKDIEQAKIWYARAAAH 205
              AQ  +   Y  G  G V KD +QA IWY  A+ +
Sbjct: 419 FTPAQSALGEIYAHGRQG-VPKDNKQAYIWYYMASMY 454



 Score = 81.6 bits (200), Expect = 3e-20
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 2/169 (1%)

Query: 53  FAKAAQQGNRLAQYNYAMMLLRGEGTPVRQQEALIWLHRAAENDMTQAQFTFGEMYEHGE 112
           + K AQ+     QYN+ +    G         AL W  RAA   + +AQ   G M+  GE
Sbjct: 267 YRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGE 326

Query: 113 LVPRSLESANQWYRRAAEGGHVQAQVELATNYFTGRGLARDYGKAFEWYTRAATAGDGGA 172
            V +  + A  WYR+AA  G   AQ  L      GRG+A+   +A  WY +AA      A
Sbjct: 327 GVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKA 386

Query: 173 QYIVASYYERGEPGVVEKDIEQAKIWYARAAAHGDPGALAKLRSLIEQG 221
           QY +   Y  G  GV E      K WY +AA  G   A + L  +   G
Sbjct: 387 QYQLGVAYSTGR-GVPENSRNALK-WYLKAAEQGFTPAQSALGEIYAHG 433



 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 1/121 (0%)

Query: 46  FDSALRDFAKAAQQGNRLAQYNYAMMLLRGEGTPVRQQEALIWLHRAAENDMTQAQFTFG 105
           +  AL  + KAA+QG   AQ +  +M   G G     ++A+ W  +AA+ D  +AQ+  G
Sbjct: 332 YQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLG 391

Query: 106 EMYEHGELVPRSLESANQWYRRAAEGGHVQAQVELATNYFTGR-GLARDYGKAFEWYTRA 164
             Y  G  VP +  +A +WY +AAE G   AQ  L   Y  GR G+ +D  +A+ WY  A
Sbjct: 392 VAYSTGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMA 451

Query: 165 A 165
           +
Sbjct: 452 S 452



 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 30/217 (13%)

Query: 1   MRAAAIAALLALCLFAFQHAQAA---RQPPAPAQELTRQAVTAYDAGAFDSALRDFAKAA 57
           MR ++I  ++ L +F  + A AA    + PA ++E                 +++  + A
Sbjct: 1   MRFSSIFKIIILNIFISKMAHAAVCEERYPADSEEC--------------QYVQELEQKA 46

Query: 58  QQGNRLAQYNYAMMLLRGEGTPVRQQEALIWLHRAAENDMTQAQFTFGEMYEHGELVPRS 117
           +QG+  AQ++       G       + A+ WL +A +     + F  G  Y +GE  P S
Sbjct: 47  EQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLS 106

Query: 118 LESANQWYRRAAEGGHVQAQVELATNYFTGRGLARDYGKAFEWYTRAAT-AGDGG----- 171
            + A +WYR+AAE G    Q  L   Y  G G  ++   A EWY +AA+   D G     
Sbjct: 107 RQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQ 166

Query: 172 -----AQYIVASYYERGEPGVVEKDIEQAKIWYARAA 203
                AQ+ +   Y  G+   V +D +Q  I   +AA
Sbjct: 167 GSASSAQFKLGVMYAHGQG--VPQDYQQTAILMRKAA 201



 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 15/166 (9%)

Query: 49  ALRDFAKAAQQGNRLAQYNYAMMLLRGEGTPVRQQEALIWLHRAA-----------ENDM 97
           AL  + KAA+ G+   Q       + G+G P   Q AL W  +AA           +   
Sbjct: 110 ALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSA 169

Query: 98  TQAQFTFGEMYEHGELVPRSLESANQWYRRAAEGGHVQAQVELATNYFTGRGLARDYGKA 157
           + AQF  G MY HG+ VP+  +      R+AAE  +  AQ+ L   YF G G+ +DY +A
Sbjct: 170 SSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQA 229

Query: 158 FEWYTRAATAGDGGAQYIVASYYERGEPGVVEKDIEQAKIWYARAA 203
             W               + + Y++  P     D   ++ WY + A
Sbjct: 230 VYWLNEGIPGSYTPGHIPLNALYDKAHPA----DRVHSQTWYRKTA 271



 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 79  PVRQQEALIWLHRAAENDMTQAQFTFGEMYEHGELVPRSLESANQWYRRAAEGGHVQAQV 138
           P  +  +  W  + A+  M + Q+ FG  Y +G  + +    A +WYRRAA  G  +AQ 
Sbjct: 257 PADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQD 316

Query: 139 ELATNYFTGRGLARDYGKAFEWYTRAATAGDGGAQYIVASYYERGEPGVVEKDIEQAKIW 198
            +   +  G G+++DY +A  WY +AA  G   AQ  +      G  GV + D  QA  W
Sbjct: 317 AIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGR-GVAQSD-RQAIAW 374

Query: 199 YARAA 203
           Y +AA
Sbjct: 375 YRKAA 379