Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 461 a.a., ATP-dependent RNA helicase, specific for 23S rRNA from Pseudomonas putida KT2440

 Score =  538 bits (1385), Expect = e-157
 Identities = 277/455 (60%), Positives = 336/455 (73%)

Query: 17  SFSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLN 76
           +F+ LPLS A LA LE LGY +MTPIQA SLP+ L GQDLIAQAKTGSGKTAAF + LLN
Sbjct: 7   AFATLPLSTAMLANLEALGYASMTPIQAQSLPVILKGQDLIAQAKTGSGKTAAFGIGLLN 66

Query: 77  RLDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGA 136
            ++ R F  QALVLCPTRELADQV +E+RRLARAE+NIKILTLCGG  + PQ  SL HGA
Sbjct: 67  PINPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLCGGVSLGPQIASLEHGA 126

Query: 137 HIAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLF 196
           HI VGTPGRI  HL++GTL LD LNTLVLDEADRMLDMGFFD IA +    P  RQTLLF
Sbjct: 127 HIIVGTPGRIQQHLDKGTLVLDGLNTLVLDEADRMLDMGFFDAIASIIGKTPSRRQTLLF 186

Query: 197 SATYPEGIAKLSQQFLRKPREVKLEEQHDDSKIRQRFFEVADSDRLNAVGLLLNHFRPVS 256
           SATYP GI +L+  F+R P++VK+E  H D++I QRF E+    RL AV  +L H+RP S
Sbjct: 187 SATYPAGIKQLAADFMRNPQQVKVESLHTDNQIEQRFIEIDPQQRLEAVTRVLGHYRPQS 246

Query: 257 TLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAAR 316
            +AFC TK +C D+V  L A+G  A ALHG+L+QR+RDQVL  FANRS SVLVATDVAAR
Sbjct: 247 CVAFCFTKQQCEDVVAHLTAKGIVAQALHGDLEQRDRDQVLTMFANRSSSVLVATDVAAR 306

Query: 317 GLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGNIEQAMGAE 376
           GLDI  L+ VINV++  D E++VHR+GRTGRA + G A+SL +  E  R   IE    + 
Sbjct: 307 GLDIDGLDMVINVELARDAEIHVHRVGRTGRAGEKGVAVSLVAPAEGHRAQAIEALQNSP 366

Query: 377 MEWQPLSDLTPASNERLLPPMVTLQILGGRKEKMRPGDILGALTGDAGYAKHQIGKINVM 436
           + W  L  L     E LLP M TL I  GRK+K+RPGDILGALTGDAG    Q+GKI + 
Sbjct: 367 LRWDQLDSLKNKGGEPLLPVMTTLCIAAGRKDKLRPGDILGALTGDAGIPGKQVGKIAIF 426

Query: 437 DMSTYVAVERSIGREAMRKLNDGTVKGKRVKVRML 471
           D   +VAVER++ ++AM++LN G +KG+ +KVR++
Sbjct: 427 DFQAFVAVERALAKQAMQRLNSGKIKGRALKVRII 461