Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 606 a.a., RNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  305 bits (780), Expect = 4e-87
 Identities = 156/340 (45%), Positives = 227/340 (66%), Gaps = 1/340 (0%)

Query: 18  FSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLNR 77
           F +LPLSP     +  +G++  +PIQ  ++P+ L+G+D+I QA+TG+GKTAAF +  +  
Sbjct: 6   FEELPLSPEVQRAIADMGFEEASPIQTEAIPVVLSGKDIIGQAQTGTGKTAAFGIPTIET 65

Query: 78  LDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGAH 137
           +D     VQAL+LCPTRELA QV+ EI++LA+ ++ I ++ + GG     Q  +L  G  
Sbjct: 66  VDPSDRSVQALILCPTRELAIQVSGEIQKLAKYKQGISVVPIYGGQSYDRQLRALKQGVQ 125

Query: 138 IAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLFS 197
           I +GTPGR+MDH++RGTL LD +N ++LDEAD MLDMGF +DI +V    P++RQT+ FS
Sbjct: 126 IVIGTPGRVMDHIQRGTLVLDNVNKIILDEADEMLDMGFREDIEFVLERIPEDRQTIFFS 185

Query: 198 ATYPEGIAKLSQQFLRKPREVKLEEQH-DDSKIRQRFFEVADSDRLNAVGLLLNHFRPVS 256
           AT  + I ++++++   P  VK+  Q    + I Q +FEV +S +   +  LL+ +   S
Sbjct: 186 ATMSKPIMEMTKRYQTDPVLVKVVHQELTVTNIDQAYFEVRNSAKQEVLSRLLDMYNLKS 245

Query: 257 TLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAAR 316
            + FCNTK    DLV  L+A+G+ + ALHG+L+Q +R  V+ +F N +  +LVATDVAAR
Sbjct: 246 AIIFCNTKRMVDDLVTGLQARGYFSDALHGDLNQNQRSAVMNKFRNGTLEILVATDVAAR 305

Query: 317 GLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALS 356
           GLD+  +EAV N D+  D E YVHRIGRTGRA + G A S
Sbjct: 306 GLDVENVEAVFNYDLPQDEESYVHRIGRTGRAGKSGKAFS 345