Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 457 a.a., ATP-dependent 23S rRNA helicase DbpA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  447 bits (1151), Expect = e-130
 Identities = 241/459 (52%), Positives = 311/459 (67%), Gaps = 9/459 (1%)

Query: 17  SFSKLPLSPAT-LATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALL 75
           +FS L + PA  L  L +LGY  MTP+QAA+LP+ LAG D+  QA+TGSGKTAAF L LL
Sbjct: 3   TFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLGLL 62

Query: 76  NRLDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHG 135
           +R+D   F  QALVLCPTRELADQV  E+RRLAR   N KILTLCGG P   Q DSL H 
Sbjct: 63  HRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHA 122

Query: 136 AHIAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLL 195
            HI V TPGR++DHL++ T++LDAL+ LV+DEADRMLDMGF D I  V    P  RQTLL
Sbjct: 123 PHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQTLL 182

Query: 196 FSATYPEGIAKLSQQFLRKPREVKLEEQHDDSKIRQRFFEVADSDRLNAVGLLLNHFRPV 255
           FSAT+PE IA +S +  ++P  ++++       I Q+FFE +  ++++ +  LL+  +P 
Sbjct: 183 FSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPA 242

Query: 256 STLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAA 315
           S + FCNTK  C+ + D L A G  ALALHG+L+QR+RDQ LV+FAN S  +LVATDVAA
Sbjct: 243 SCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDVAA 302

Query: 316 RGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGNIEQAMGA 375
           RGLDI  LE V+N ++  DPEV+VHRIGRT RA   G A+S  +  E  R   + + +  
Sbjct: 303 RGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEMLQL 362

Query: 376 EMEWQPLSDLTPASNERLLP---PMVTLQILGGRKEKMRPGDILGALTGDAGYAKHQIGK 432
           ++ W     L   + + LLP    M TL I GG+K KMRPGDILGALTGD G     IGK
Sbjct: 363 KLNW-----LNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGK 417

Query: 433 INVMDMSTYVAVERSIGREAMRKLNDGTVKGKRVKVRML 471
           INV  M  YVAV +++ ++A ++L +G +KGK  +VR+L
Sbjct: 418 INVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLL 456