Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 567 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  288 bits (737), Expect = 3e-82
 Identities = 156/356 (43%), Positives = 228/356 (64%), Gaps = 2/356 (0%)

Query: 18  FSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLNR 77
           F+ L +S   L  +E +GY   + IQA S+P+ L G D+I QA+TG+GKTA+F + +++R
Sbjct: 7   FADLGISAEILQAVEGMGYTQPSEIQAQSIPLMLEGHDVIGQAQTGTGKTASFGIPIVDR 66

Query: 78  LDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGAH 137
           +D+     QAL+LCPTRELA QV  EI +LA+ ++ I    + GG  +  Q  +L  G  
Sbjct: 67  VDSSSKQPQALILCPTRELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRTLKRGVQ 126

Query: 138 IAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLFS 197
           I VGTPGR+MDH+ RGTL LD + T+VLDEAD MLDMGF +DI  V S  P++RQT+ FS
Sbjct: 127 IVVGTPGRVMDHMNRGTLKLDTVKTIVLDEADEMLDMGFREDIETVLSQMPEDRQTIFFS 186

Query: 198 ATYPEGIAKLSQQFLRKPREVKLEEQH-DDSKIRQRFFEVADSDRLNAVGLLLNHFRPVS 256
           AT  + I  L++++   P  VK++ +      I Q ++EV    ++  +  L+N  +   
Sbjct: 187 ATMAKPIMDLTRKYQTNPEIVKIQRKELTVENISQVYYEVKPPLKMELITRLINIHQFNL 246

Query: 257 TLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAAR 316
            + FCNTK    ++ + L A+G  A ALHG+L Q +RD+V+ +F    C+VLVATDVAAR
Sbjct: 247 GVVFCNTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLVATDVAAR 306

Query: 317 GLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALS-LASMNEMGRVGNIEQ 371
           G+D+  +E V N D+  D E YVHRIGRTGRA + G A+S +    ++ R+ ++E+
Sbjct: 307 GIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFITGRKDIFRLKDLER 362



 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 22/66 (33%), Positives = 39/66 (59%)

Query: 405 GRKEKMRPGDILGALTGDAGYAKHQIGKINVMDMSTYVAVERSIGREAMRKLNDGTVKGK 464
           G+K+++RP DI+GA+ G+AG +   IG I++ D  ++V V        +  +   T+KGK
Sbjct: 499 GKKDRIRPNDIVGAIAGEAGISGRLIGGIDIFDNFSFVDVPSKDASHVINVMKRNTIKGK 558

Query: 465 RVKVRM 470
            V + +
Sbjct: 559 PVNMEL 564