Pairwise Alignments

Query, 473 a.a., DEAD/DEAH box helicase from Cupriavidus basilensis FW507-4G11

Subject, 457 a.a., ATP-dependent RNA helicase, specific for 23S rRNA from Escherichia coli BL21

 Score =  447 bits (1151), Expect = e-130
 Identities = 242/452 (53%), Positives = 301/452 (66%), Gaps = 8/452 (1%)

Query: 23  LSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQAKTGSGKTAAFALALLNRLDARR 82
           L PA L  L +LGY TMTP+QAA+LP  LAG+D+  QAKTGSGKTAAF L LL ++DA  
Sbjct: 10  LPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASL 69

Query: 83  FDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLCGGSPMRPQADSLAHGAHIAVGT 142
           F  QALVLCPTRELADQV  E+RRLAR   N KILTLCGG P   Q DSL H  HI V T
Sbjct: 70  FQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVAT 129

Query: 143 PGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDIAYVASHCPKERQTLLFSATYPE 202
           PGR++DHL++GT++LDALNTLV+DEADRMLDMGF D I  V    P  RQTLLFSAT+PE
Sbjct: 130 PGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPE 189

Query: 203 GIAKLSQQFLRKPREVKLEEQHDDSKIRQRFFEVADSDRLNAVGLLLNHFRPVSTLAFCN 262
            IA +S +  R P  ++++       I Q+F+E +   ++  +  LL+  +P S + FCN
Sbjct: 190 AIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCN 249

Query: 263 TKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQFANRSCSVLVATDVAARGLDIAQ 322
           TK  C+ + D L   G  AL+LHG+L+QR+RDQ LV+FAN S  VLVATDVAARGLDI  
Sbjct: 250 TKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKS 309

Query: 323 LEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASMNEMGRVGNIEQAMGAEMEWQPL 382
           LE V+N ++  DPEV+VHRIGRT RA   G A+S  +  E  R   I   +  ++ WQ  
Sbjct: 310 LELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQ-- 367

Query: 383 SDLTPASNE---RLLPPMVTLQILGGRKEKMRPGDILGALTGDAGYAKHQIGKINVMDMS 439
              TP +N     L   M TL I GG+K KMRPGD+LGALTGD G     IGKI V    
Sbjct: 368 ---TPPANSSIATLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHPAH 424

Query: 440 TYVAVERSIGREAMRKLNDGTVKGKRVKVRML 471
            YVAV +++  +A ++L  G +KGK  +VR+L
Sbjct: 425 VYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLL 456