Pairwise Alignments

Query, 506 a.a., SusD family. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 507 a.a., RagB/SusD family nutrient uptake outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  123 bits (309), Expect = 1e-32
 Identities = 141/527 (26%), Positives = 225/527 (42%), Gaps = 55/527 (10%)

Query: 3   LKPYILIVLL---MAWAQSCNEEKLNPVNPNELSTETFYKTGPQYVAAVNAAYAALQAN- 58
           +K Y +I+LL   +    SC ++ L P   + L+ +  + T    +A VNA YA L+   
Sbjct: 1   MKKYNIILLLTIALVIQFSC-KKSLEPKVYSILTEKNAFVTKSDAIAGVNAVYARLKGPS 59

Query: 59  -----DLYNREYFFIQDLLSDDVASGGAQLEAHRARVLNHVFDGSNSLVLANWRGWYRVI 113
                D +   +F + DL +D    G         ++ N  ++ SN L+L +WR  Y++I
Sbjct: 60  VGDNYDYWTVRHFALTDLTTD---LGHCDYGGDPGQLSNIQWNSSNGLILEDWRQIYKLI 116

Query: 114 QRANLVIANVDQPQEDISENLRDRVLGEAYFLRGLAYYELSTLWGGVPLMT---VSATGP 170
             AN+ I+N+  P + I++  + + L E  FLR +AY +++ +WG   L+T   ++A   
Sbjct: 117 ANANVAISNIT-PMKSITDAEKSKFLAEIRFLRAIAYMDITDIWGPSVLITEKEMAAKDY 175

Query: 171 DGAPR-ASQEDSYQQVIDDLTAAIGLLP----PKSTYSGADVGRASIGAAQAVLAKLHLF 225
              P+  S  D  + +I +L  A   LP        Y   DVGRA+ GAA  +LAKL+L 
Sbjct: 176 SAKPQLTSLADMNKYLIGELEYAAANLPLNYVNNPIYPNNDVGRATKGAALGMLAKLYLR 235

Query: 226 RGDFAAAKPLLQAIIDSGEYRLVDRYLDNFEEENENNAESLWEVQFSEDFGTDGGWNADG 285
              +  A    Q +ID   Y L   Y   F E N    E+++ V    D   +G    + 
Sbjct: 236 DHQWQKAADYCQQVIDLKVYDLYPTYAGLFAESNTWCVENIFSV--LSDANVNGTELLNH 293

Query: 286 NGIAE---VTFRGQEYGPTAWRNIIPNPTLVAEFEQESNGAEKDDPRYGYTLYSLGDTFN 342
            G  E   +T R Q Y  T W           +F    N A+ D  +  +  Y+  D   
Sbjct: 294 FGPLEHPVLTERWQYYAVT-W-----------DFYNSFNNAD-DRKKMFFAEYTGTDNLI 340

Query: 343 NGES-VLSEDNVQGNTSVPSWRKYQMIYKREAENTQSGINFRVIRYADVLLMMAEVENET 401
           + ++  L      G   +P+    +      A     G +  ++RYAD+LL  AE  NE 
Sbjct: 341 HKQAPTLGAIAPAGVLYMPNVATSKYADPNGANTYYDGHSVNILRYADILLSRAEALNEI 400

Query: 402 SGPAS--ALPYINQVRARADVAMPPYPTAQYPTGTQEEMRRAIQHERRVELAGEQIRNRD 459
           +G  S  ++  +N+V+ R+                Q   R AI  ER  EL  E  R  D
Sbjct: 401 NGGPSTESIELVNKVKRRSHAT-----ELVLANLNQSTFRDAILQERGWELFYEGKRRAD 455

Query: 460 IRRWRRMGYLENEPI-------PVYSDRYDLLPIPLSEIDNNSALTN 499
           + R  +   + N  +        +   R    P P S++  N  L N
Sbjct: 456 LVRMGKYEQVVNAYLARIGKSPSIQMPRDQFFPYPTSQVSINPNLNN 502