Pairwise Alignments

Query, 407 a.a., endopeptidase Clp ATP-binding regulatory subunit (clpX) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 426 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpX (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  414 bits (1065), Expect = e-120
 Identities = 218/386 (56%), Positives = 275/386 (71%), Gaps = 4/386 (1%)

Query: 6   CSFCGRNKKDVDLMVSGISAHICNFCIDQAYQILGEEEKTKKQEKKPKFKLRKPKELTEY 65
           CSFCG+++ +V  +++G S ++C+ C++    I+ EE K +   K+   KL  P EL  +
Sbjct: 16  CSFCGKSQHEVRKLIAGPSVYVCDECVELCNDIIREEIK-EISPKRDNDKLPTPHELRAH 74

Query: 66  LNNYVIGQDEAKKVLSVAVYNHYKRLLQKDNKDDVKIEKSNIIMVGDTGTGKTYLAKTLA 125
           L++YVIGQD AKKVLSVAVYNHYKRL     KD V++ KSNI+++G TG+GKT LA+TLA
Sbjct: 75  LDDYVIGQDRAKKVLSVAVYNHYKRLKNSSPKDGVELGKSNILLIGPTGSGKTLLAETLA 134

Query: 126 KILEVPFCIADATVLTEAGYVGEDVESILTRLLQSADYNLEAAERGIVYIDEIDKIARKS 185
           + L VPF +ADAT LTEAGYVGEDVE+I+ +LLQ  DY++E A+RGIVYIDEIDKI+RKS
Sbjct: 135 RSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKS 194

Query: 186 DNPSITRDVSGEGVQQAMLKLLEGTTVNVPPQGGRKHPDQKMIAVNTEDILFICGGAFDG 245
           DNPSITRDVSGEGVQQA+LKL+EGT   VPPQGGRKHP Q+ + V+T  ILFICGGAF G
Sbjct: 195 DNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAG 254

Query: 246 ISRHIANRLNT-QPLGFSK--KTESDVVDRNNLLQYVTAPDLKSFGLIPELIGRLPVLTH 302
           + + I  R +    +GF    K E D    +  L  V   DL  +GLIPE IGRLPV+  
Sbjct: 255 LEKVIEQRAHVGSGIGFGAQVKGEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVAT 314

Query: 303 LDPLDKETLKSILTEPKNALTKQYIKLMDMEGVKLEFEESGIDYIVEKAVEYNLGARGLR 362
           L  LD+E L  IL+EPKNALTKQY  L +MEGV+LEF E  +  I  KA+    GARGLR
Sbjct: 315 LTELDEEALVQILSEPKNALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGARGLR 374

Query: 363 SICEAIITDAMYELPSDQETKELVVN 388
           SI E I+ D MY++PS     + VV+
Sbjct: 375 SIVEGILLDTMYDIPSIDGVVKAVVD 400