Pairwise Alignments

Query, 407 a.a., endopeptidase Clp ATP-binding regulatory subunit (clpX) from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 442 a.a., ATP-dependent protease ATP-binding subunit HslU (RefSeq) from Shewanella sp. ANA-3

 Score =  115 bits (289), Expect = 2e-30
 Identities = 89/257 (34%), Positives = 118/257 (45%), Gaps = 61/257 (23%)

Query: 150 VESILTRLLQSADYNLEAAE----RGIVYIDEIDKIARKSDNPSITRDVSGEGVQQAMLK 205
           +E    +L+   D   +A E     GIV++DEIDKI ++ +      DVS EGVQ+ +L 
Sbjct: 225 IEEEAAKLVNQEDLKEQAIELVEQHGIVFLDEIDKICKRGETSG--PDVSREGVQRDLLP 282

Query: 206 LLEGTTVNVPPQGGRKHPDQKMIAVNTEDILFICGGAFDGISRHIANRLNTQPLGFSKKT 265
           L+EG TV        KH       V T+ ILFI  GAF                      
Sbjct: 283 LVEGCTVTT------KHG-----MVKTDHILFIASGAFQMA------------------- 312

Query: 266 ESDVVDRNNLLQYVTAPDLKSFGLIPELIGRLPVLTHLDPLDKETLKSILTEPKNALTKQ 325
                              K   LIPEL GRLP+   LD L  +  K ILTEP  +LT+Q
Sbjct: 313 -------------------KPSDLIPELQGRLPIRVELDALSADDFKRILTEPHASLTEQ 353

Query: 326 YIKLMDMEGVKLEFEESGIDYIVEKAVEY-----NLGARGLRSICEAIITDAMYELPSDQ 380
           YI LM  EGV +EF ESGI+ I + A +      N+GAR L ++ E ++ D  YE  SD+
Sbjct: 354 YIALMATEGVTIEFAESGIESIAKAAWQVNERTENIGARRLHTVMEKLMEDISYE-ASDK 412

Query: 381 ETKELVVNRKYAQRQFD 397
                V++  Y     D
Sbjct: 413 SGSSFVIDADYVSAHLD 429



 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 42/103 (40%), Positives = 66/103 (64%), Gaps = 1/103 (0%)

Query: 59  PKELTEYLNNYVIGQDEAKKVLSVAVYNHYKRLLQKDNKDDVKIEKSNIIMVGDTGTGKT 118
           P+E+   L+ ++IGQ +AK+ ++VA+ N ++R+ Q D     ++   NI+M+G TG GKT
Sbjct: 6   PREIVHELDAHIIGQKKAKRSVAVALRNRWRRM-QLDADFRQEVTPKNILMIGPTGVGKT 64

Query: 119 YLAKTLAKILEVPFCIADATVLTEAGYVGEDVESILTRLLQSA 161
            +A+ LAK+   PF   +AT  TE GYVG++VE I+  L   A
Sbjct: 65  EIARRLAKLANAPFIKVEATKFTEVGYVGKEVEQIIRDLTDIA 107