Pairwise Alignments

Query, 324 a.a., Fe2+-dicitrate sensor, membrane component from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 290 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  112 bits (280), Expect = 1e-29
 Identities = 84/237 (35%), Positives = 124/237 (52%), Gaps = 18/237 (7%)

Query: 80  AAVIVLLLTGGITLWHLSSSPATEVKLMVKSTDPTQRAKITLPDGSMVHLNVNSTLTYPE 139
           AA  V+LL   +   +L   PAT   +   ST    R  + LPDG+ V LN  S+L+YPE
Sbjct: 54  AAAAVVLLCLSVWTAYLYMQPAT---IQTVSTLAETRT-VHLPDGTSVTLNHYSSLSYPE 109

Query: 140 EFEDGLRRVSLEGEAFFEVQRDTDRPFLVSSAGLETKVLGTSFNVNAYKGKEEM-VTVKS 198
            F+   R V L GEA+FEV +D   PF+V +  ++ +VLGT FNV+AY    ++  T+ +
Sbjct: 110 RFKSDNREVELSGEAYFEVSKDPKHPFIVQTETIDVQVLGTHFNVDAYPDNPDVKTTLLT 169

Query: 199 GKVQVSPHQRPEKRVLLLPDEAAVLDGPTAALLKQPYD-ADKIIGWKSGRLAFDMVPFDE 257
           G V VS ++    R++L P+EAA+ +     L ++  + A   I W+ G   FD +P  E
Sbjct: 170 GSVAVS-NKNNSVRMVLKPNEAAIYNKVEQKLTRKVLENAGDEISWRHGEFIFDDLPLQE 228

Query: 258 VVATLERYYHTPI-----TLKNYQEGSCMIKASYQN-NGLQFILSGLQLLVDFEYEK 308
           +   L   + T I     TL+NY+     I A ++N   L  ILS L     F Y +
Sbjct: 229 IARELSNSFGTTIHIADSTLRNYR-----ITARFRNGEDLDAILSVLHNAGYFNYSR 280