Pairwise Alignments

Query, 398 a.a., Retron-type reverse transcriptase from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 419 a.a., reverse transcriptasematurase of intron RmInt1 protein from Sinorhizobium meliloti 1021

 Score =  155 bits (391), Expect = 3e-42
 Identities = 107/361 (29%), Positives = 176/361 (48%), Gaps = 22/361 (6%)

Query: 38  SVGVDGESWNAYGLRLPDRLPELLRTVKSGEYKAPQIRRVYIPKGKTGKRPLGIPTIEDK 97
           + GVDG++   +   L   L ++   + SG Y  P +R V IPK   G+R LG+PT+ D+
Sbjct: 31  AAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSIPKKAGGERVLGVPTVSDR 90

Query: 98  VLQPSVRSVLEPIYEEDFKEFSYGFRPNRSCHHAIEYMFEKVSYGRMRYIIDADIQDYFG 157
           + Q  V+ ++EP  +  F   SYG+RP +S   A+    ++    +  ++++ DI+  F 
Sbjct: 91  IAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRC--WKYDWVLEFDIKGLFD 148

Query: 158 SIDHGLLRVFLDRRVKDGVVRKMLDKWLKAGILEDKQLHYPKGGTPQGGIVSPILSNIYL 217
           ++ H LL   + + VK       +++WL A + ++ ++     GTPQGG+VSPIL+N++L
Sbjct: 149 NLPHDLLLKAVRKDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQGGVVSPILANLFL 208

Query: 218 HYVLDEWFSDKIQPLLTGKSFMVRYADDFVMGFEKGEDAKRVMAVLDKRFTKYGLRLHPE 277
           HY  D W + +  P L       RYADD ++  +  + A+ +   L  R    GL++HP 
Sbjct: 209 HYAFDLWMT-RTHPDLP----WCRYADDGLVHCQSEQQAEALKVELSSRLAACGLQMHPT 263

Query: 278 KTKVIDLNTNIRGER----SFDFLGFAHYMGKTRK--------GRLVLKRKTSSKKLVMA 325
           KTK++      R E     +FDFLG+     +           G       T+ K +   
Sbjct: 264 KTKIVYCKDQRRREAYPNVTFDFLGYQFRPRRVANTQWDEFFCGYTPAVSPTALKSMRAT 323

Query: 326 ITKTGDWIKGNRHRKLKELICDLNVRLRGHYAYYGVTFNVRSLNKYHRCVERLLHKWLNR 385
           I      I       L E+   LN  LRG  AYYG  ++  +L+     V + L  W+ R
Sbjct: 324 IKSLN--IPRQTPGTLAEIAKQLNPLLRGWIAYYG-RYSRSALSTLADYVNQKLRAWIRR 380

Query: 386 R 386
           +
Sbjct: 381 K 381