Pairwise Alignments

Query, 660 a.a., Type IV secretory pathway, VirD4 components from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 677 a.a., mobilization protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  339 bits (870), Expect = 2e-97
 Identities = 191/578 (33%), Positives = 328/578 (56%), Gaps = 13/578 (2%)

Query: 50  FVENVGELPFLKDDIYAKILCLGMLYVSLLGAKGKKDTAIKWLPALI-TMVLGSVLFFLA 108
           F+  +  LP  +D  ++K   L +L ++ +G   +K+  I    +++  +VLG +  F +
Sbjct: 49  FMARLARLPMYQDPFFSKSFLLLLLCLTSIGTLSRKNKDIDIRKSIVFPLVLGLISLFGS 108

Query: 109 TYW-----EAVVLGRLVFGYCYLISMVTGYLMVLWGGSRLSRCLKEQVSKDVFNHDNETF 163
           TY+     + ++         Y++    G L+V      +S+ ++ ++ KD +N + E+F
Sbjct: 109 TYFLGSKGKEILPMTTWDNIIYVLGSFLGTLLVHISLDNISKVIRSKLGKDKWNVEGESF 168

Query: 164 PQEERLLENEYSVNLPAIYRLKQKSRPSWINIINPFRALLVLGTPGSGKSYFVIRHVIVQ 223
            Q  + +++  SVN+P+++  + K    +INI N FR  L++G PGSGKS+ V+   I Q
Sbjct: 169 MQATKPIDSPSSVNIPSLFYFRGKVHRGFINIENVFRGTLLIGNPGSGKSFGVVMPFIRQ 228

Query: 224 HIAKGFSMFIYDFKYDDLSRIAY-NALRKNKAAYRIAPTFYTINFDDLSRSHRCNPLEPS 282
            +AK F + +YDFK+ DL+ +AY + L   K        F+ IN   + RS R N L P 
Sbjct: 229 LLAKEFCICLYDFKFHDLAEVAYYHYLLAKKKGNCKDHDFHVINLTKVERSRRINVLRPD 288

Query: 283 TMLDITDASEASRTIMMGLNREWIKKQGD-FFVESPINFLTAVIWFLKRYKEGKYCTLPH 341
            +  + DASE +  ++  L +       D FF +S +NFL + I+F  +++ G+Y T  H
Sbjct: 289 YIRTLADASETAEALVEALKKGDKSGGSDQFFTQSAVNFLASCIYFFAQHQSGRYSTFAH 348

Query: 342 VIEMMQVEYEKLFSVLRCEPEIEVLINPFVSAFMQGAADQLEGQIASAKITMARLSSPQL 401
           V+  +   Y+++F VL    E+  L++PF +A+   A DQLEGQ+ + KI ++RL++ + 
Sbjct: 349 VLSFLNCSYDEIFGVLFTNKELTSLLSPFYTAYKAKAFDQLEGQVGTLKIFISRLATKET 408

Query: 402 YYVLSESEFTLDINNPDRPKIVCMGNNPQKQQVYGAVLSLYISRITKLANQKGKLKSSLV 461
           ++V S  +F L I+ P+ P I+ + N+P  Q +  A  S+ ++R+T+L N KG L S+L+
Sbjct: 409 FWVFSGDDFDLKISRPENPSILVLANDPNTQNINSACYSVVLNRLTRLINSKGNLPSALI 468

Query: 462 FDEFPTIYFNGIDNLIATARSNKVATCLGVQDYSQLKKDYGREHAEVIMNTVGNIVSGQV 521
            DE PT++ + I+NLIATARSNKVA  +G+Q+  Q ++ YG++ A  I   VGN++SG V
Sbjct: 469 IDELPTLFVHRIENLIATARSNKVAVLMGLQEIPQFQQQYGKDTANTITAVVGNVLSGAV 528

Query: 522 LG-DTAKQLSERFGKIRQPRQSRSVNSNDTSISHSVQLDLAVPQSTIASLSSGEFVGMVA 580
              +T + L   FGK++Q  +S S++ + TS+S S +L+  +P   IASL +GE VG++A
Sbjct: 529 RNKETLEWLERLFGKVKQQSESLSIDRSKTSLSLSEKLEPLIPAGKIASLRTGELVGVLA 588

Query: 581 DTP----DQPIKLKGFHAAIQNDHEAIRREERGYRPIP 614
                      +    +  +  D +AI  E+  Y  +P
Sbjct: 589 SDAVKEYSGEFETSAINCRVNLDMKAIEIEKENYPELP 626