Pairwise Alignments

Query, 660 a.a., Type IV secretory pathway, VirD4 components from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 652 a.a., mobilization protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  361 bits (926), Expect = e-104
 Identities = 213/632 (33%), Positives = 353/632 (55%), Gaps = 30/632 (4%)

Query: 27  IHLYLELPCVFSKWGLSLPVLTVFVENVGELPFLKDDIYAKILCLGMLYVSLLGAKGKKD 86
           + +YL  P     WG    +    +  V  L    + +Y+K+  L ++ +  +G   KK 
Sbjct: 28  VFVYLGAPF----WG----IFNAGLLKVKSLIIFHELLYSKLAVLLLICLVSIGTLSKKQ 79

Query: 87  TAIKWLPALI-TMVLGSVLFF--LATYWEAVVLGRLVFGYC------YLISMVTGYLMVL 137
             +     ++  + LG + +F  +  Y +  VL   +F Y       Y+I    G +++ 
Sbjct: 80  LDLDPKTKIVYPLCLGLLCYFGSMLFYGKKSVL---LFSYTSATDLVYMILSFLGAIVIS 136

Query: 138 WGGSRLSRCLKEQVSKDVFNHDNETFPQEERLLENEYSVNLPAIYRLKQKSRPSWINIIN 197
                +S+ ++  + KD +N + E+F Q+    E+ YSVN+P ++  K+K R  WIN++N
Sbjct: 137 ISIDNVSKIIRSGLGKDKWNVEAESFMQQTIKTEHAYSVNIPMLFYYKRKVRKGWINLVN 196

Query: 198 PFRALLVLGTPGSGKSYFVIRHVIVQHIAKGFSMFIYDFKYDDLSRIAYNALRKNKAAYR 257
           PFRA +V+GTPGSGKS+ ++   I Q IAKGF+  IYDFK+ DL RIAY+  RK +   +
Sbjct: 197 PFRATMVIGTPGSGKSFSIVNPFIRQLIAKGFASLIYDFKFPDLGRIAYHQFRKCRLEGK 256

Query: 258 IAPT-FYTINFDDLSRSHRCNPLEPSTMLDITDASEASRTIMMGLNREWIKKQGD-FFVE 315
           +    F+ IN + + +S R NP     +  + DASE +  ++  L +       D FF +
Sbjct: 257 LEGFGFHVINLNQVEKSRRINPFRADYIRTLADASETAEALVEALKKGDKASGSDAFFTQ 316

Query: 316 SPINFLTAVIWFLKRYKEGKYCTLPHVIEMMQVEYEKLFSVLRCEPEIEVLINPFVSAFM 375
           S INFL + I+F+ RY  G + +LPHV+  +   Y+++F+VL  EPE+  L++PF SAFM
Sbjct: 317 SAINFLASCIYFMSRYNNGIFSSLPHVMSFLNRPYQEIFTVLFTEPELVSLLSPFRSAFM 376

Query: 376 QGAADQLEGQIASAKITMARLSSPQLYYVLSESEFTLDINNPDRPKIVCMGNNPQKQQVY 435
             A DQLEGQI + KI ++R+++ + ++V S  +F L I++   P I+ + N+P  Q + 
Sbjct: 377 AKAFDQLEGQIGTLKIFISRMATKETFWVFSGDDFNLKISDASSPGILVLANDPNTQNIN 436

Query: 436 GAVLSLYISRITKLANQKGKLKSSLVFDEFPTIYFNGIDNLIATARSNKVATCLGVQDYS 495
               S+ ++R+T+L N KG L S+L+ DE PT++ + I+NLIATARSNKVA  +G+Q+  
Sbjct: 437 SGCYSVVLNRLTRLINSKGNLPSALILDEVPTLFVHRIENLIATARSNKVAVLMGLQELP 496

Query: 496 QLKKDYGREHAEVIMNTVGNIVSGQVLG-DTAKQLSERFGKIRQPRQSRSVNSNDTSISH 554
           Q K+ YG++ A  I + VGN++SG V   +T   L    GK +Q  +S S++ +  S S 
Sbjct: 497 QFKQQYGKDTATTITSVVGNVLSGSVRNKETLDWLERILGKSKQMGESISIDRSKVSKSI 556

Query: 555 SVQLDLAVPQSTIASLSSGEFVGMVADTPDQPI----KLKGFHAAIQNDHEAIRREERGY 610
           S +L++ +P   IASL +GE VG++A           +    +  +  D + I +EE+ Y
Sbjct: 557 SEKLEVLIPAGKIASLGAGEIVGVIAADASSSFTGQYETSAINCRVSLDLKEIEKEEKEY 616

Query: 611 RPIPPCRKLTEHE---VANNYKRIKSEVSELI 639
             +P       H+   +  N+ +I  ++  L+
Sbjct: 617 VELPDFYDFGGHKEEILRRNFLQINQDIESLV 648