Pairwise Alignments

Query, 660 a.a., Type IV secretory pathway, VirD4 components from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 669 a.a., putative mobilization protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  620 bits (1599), Expect = 0.0
 Identities = 319/665 (47%), Positives = 434/665 (65%), Gaps = 9/665 (1%)

Query: 1   MATGENQQTLRKILDLTRKVSIAILLIHLYLELPCVFSKWGLSLPVLTVFVENVGELPFL 60
           M+  ++ + L K++D  R +S+  +++++Y        +W +++ V+   + N      L
Sbjct: 1   MSQEDDLRGLAKVMDFMRALSVLFVVVNIYWFCYPSIREWNVNIGVVDRILLNFQRTTGL 60

Query: 61  KDDI-YAKILCLGMLYVSLLGAKGKKDTAIKWLPALITMVLGSVLFFLATYWEAVVLGRL 119
              I + K+  +  L +S LG KG K+  IKW+     +  G VLFF   +   + +  L
Sbjct: 61  FGSILWTKLFSVTFLALSCLGTKGVKEEKIKWVHIWTALSAGVVLFFFNWWLLCLPVPLL 120

Query: 120 VFGYCYLISMVTGYLMVLWGGSRLSRCLKEQVSKDVFNHDNETFPQEERLLENEYSVNLP 179
                Y+ ++  GYL +L  G  +SR LK+ +  DVFN++NE+F QE RL+ENEYSVNLP
Sbjct: 121 ARTAFYIFTLAVGYLCLLAAGVWISRLLKQNLMDDVFNNENESFMQETRLIENEYSVNLP 180

Query: 180 AIYRLKQKSRPSWINIINPFRALLVLGTPGSGKSYFVIRHVIVQHIAKGFSMFIYDFKYD 239
             +   +K    WIN++NPFRA +VLGTPGSGKS+ V+   I Q I KG++ +IYDFK+ 
Sbjct: 181 TRFYYGKKWNDGWINVVNPFRASIVLGTPGSGKSFAVVNSYIKQQIEKGYAAYIYDFKFP 240

Query: 240 DLSRIAYNALRKNKAAYRIAPTFYTINFDDLSRSHRCNPLEPSTMLDITDASEASRTIMM 299
           DLS IAYN L  +   Y++ P FY INFDD SRSHRCNPL P  M DI+DA E+S +IM+
Sbjct: 241 DLSTIAYNHLIGHLEGYKVPPKFYVINFDDPSRSHRCNPLNPKFMTDISDAYESSYSIML 300

Query: 300 GLNREWIKKQGDFFVESPINFLTAVIWFLKRYKEGKYCTLPHVIEMMQVEYEKLFSVLRC 359
            LNR W  KQGDFFVESP     A+IWFL+ YK+G+YCT PH +E +   YE++F ++  
Sbjct: 301 NLNRSWAAKQGDFFVESPTILFAAIIWFLRVYKDGRYCTFPHAVEFLNKPYEQIFPIMSS 360

Query: 360 EPEIEVLINPFVSAFMQGAADQLEGQIASAKITMARLSSPQLYYVLSESEFTLDINNPDR 419
            PE+E  ++PF+ A++ GAADQL GQIASAKI ++R+ SP LY+V+S  EF+LDINNPD 
Sbjct: 361 YPELENYLSPFLDAWLAGAADQLMGQIASAKIPLSRMISPALYWVMSADEFSLDINNPDE 420

Query: 420 PKIVCMGNNPQKQQVYGAVLSLYISRITKLANQKGKLKSSLVFDEFPTIYFNGIDNLIAT 479
           PKI+C+GNNP +Q +YGA L LY SRI K+ N+KG+LKSS++ DE PTI+  G+DNLIAT
Sbjct: 421 PKILCIGNNPDRQAIYGAALGLYNSRIVKIVNKKGRLKSSIIIDELPTIFIKGLDNLIAT 480

Query: 480 ARSNKVATCLGVQDYSQLKKDYGREHAEVIMNTVGNIVSGQVLGDTAKQLSERFGKIRQP 539
           ARSNKVA  LG QD+SQL +DY  + A+VI+NTVGNI SGQV+G+TAK LSERFGKI Q 
Sbjct: 481 ARSNKVAVLLGFQDFSQLIRDYTDKEAKVIINTVGNIFSGQVVGETAKTLSERFGKILQK 540

Query: 540 RQSRSVNSNDTSISHSVQLDLAVPQSTIASLSSGEFVGMVADTPDQPIKLKGFHAAIQND 599
           R S S+N  D S S S Q+D  +P S I+ L+ G FVG VAD   + I+ K FH  I  D
Sbjct: 541 RHSISINRQDVSTSISTQMDSLIPPSKISGLTQGMFVGSVADNFGERIEQKIFHCEIVVD 600

Query: 600 HEAIRREERGYRPIPPCRKLTEHE--------VANNYKRIKSEVSELIESELDRMLDSPG 651
            + I  EE+ Y+ IP      + E        V  NY RIK +V  ++  EL+R+   P 
Sbjct: 601 AKKIAEEEKAYQKIPVITGFVDGEGVNHMKEMVQENYNRIKEDVRRIVADELERIAADPN 660

Query: 652 LAGLI 656
           L  L+
Sbjct: 661 LRHLL 665