Pairwise Alignments

Query, 327 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 295 a.a., tyrosine-type recombinase/integrase from Methanococcus maripaludis JJ

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 51/151 (33%), Positives = 67/151 (44%), Gaps = 13/151 (8%)

Query: 146 LYATGIRIGEALDLKDEDVNLEDGYIRIQDSKNKKQRAIPISASLNLVCKEYLSYRAWLP 205
           L  TG+RI E  ++   DV+LED  I I+D K  K R + I   L    K Y+ YR  L 
Sbjct: 139 LLKTGVRISEFQNILLNDVDLEDRSIYIRDGKGGKDRYVFIDNELLGYLKNYIEYRENL- 197

Query: 206 YKNSTTGFFFVNVSGNKCGQGFRKWFRKCLEHANIPYLGEKHGPRIHDLRHTFAVNSLAG 265
             N  T  FFV  +G K        FR  L+      +     P  H  RHTF   +LA 
Sbjct: 198 --NLKTDCFFVTKNGKKVTNYAIDKFRDYLKEVTKDKIPFDVTP--HVFRHTF--GTLAC 251

Query: 266 MAEAGIDLYASLPILSNYLGHQSIGATDHYV 296
             E       +L +LS  +GH ++  T  YV
Sbjct: 252 EDE------MNLIVLSKIMGHSNLNTTSGYV 276