Pairwise Alignments

Query, 337 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (249), Expect = 5e-26
 Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 21/287 (7%)

Query: 21  ENGASLNTITAYRDTFVLLLSFIEKHRKVKLEKLTLDYITKETIVAFLDWIQSERKCSNS 80
           E G + NT+ +YR+    LL ++ +++        LD+I+   +  +  W+ SE+    +
Sbjct: 22  ERGLAENTVASYRNDLSKLLEWMAQNQ------YRLDFISFAGLQEYQSWL-SEQNYKPT 74

Query: 81  TRNLRLAAIHSFYRYLQYQHLDNLYECQRILSIRSKKTAKDSIKYLSVEGIRLLLQQPDT 140
           ++   L+AI   ++YL   H + +        + S K      K LS   +  LL  PD 
Sbjct: 75  SKARMLSAIRRLFQYL---HREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLSAPDP 131

Query: 141 TTRKGRRNLALLALMYDTGARVQEIIDLTPSMLRLDKPATIKIIGKGNKARLVPMLDAQT 200
            +    R+ A+L L+Y TG RV E++ LT   + L +   ++++GKG K RLVPM +   
Sbjct: 132 QSPLELRDKAMLELLYATGLRVTELVSLTMENMSL-RQGVVRVMGKGGKERLVPMGENAI 190

Query: 201 VHLKNYLKEYE---LDSPSAKLYPLFSNSKKEKLTRAGINYIIQKYVGMARKENKLMIPL 257
             ++ +L++     L   ++ +  +F +S+ +++TR    + I+ Y  +A  + + + P 
Sbjct: 191 EWIETFLQQGRSLLLGEQTSDI--VFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSP- 247

Query: 258 KITCHSFRHTKAMHLLQAGVNLVYIRDILGHVSVQTTEIYARADSKQ 304
               H  RH  A HLL  G +L  ++ +LGH  + TT+IY    +++
Sbjct: 248 ----HVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATER 290