Pairwise Alignments

Query, 337 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 89/307 (28%), Positives = 141/307 (45%), Gaps = 32/307 (10%)

Query: 18  LPNENGASLNTITAYRDTFVLLLSFIEKHRKVKLEKLTLDYITKETIVAFLDWIQSERKC 77
           L  E   S  T+ AY       L+F+  H         +  +    +  FL      RK 
Sbjct: 42  LAEERRLSEKTVDAYERDTRQFLTFLTGHLAGPPRLSDICALRPADLRGFL---AQRRKG 98

Query: 78  SNSTRNLR--LAAIHSFYRYLQYQHLDNLYECQRILSIRSKK------TAKDSIKYLSVE 129
               R L   LA + SF RYL+   L N      + S +  K      T ++++K ++ +
Sbjct: 99  GAGARTLGRGLAGLRSFLRYLERNGLANAAGAGAVRSPKQPKSLPKALTDREALKVVTAD 158

Query: 130 GIRLLLQQPDTTTRKGRRNLALLALMYDTGARVQEIIDLTPSMLRLDKPAT-IKIIGKGN 188
               L ++P    R    N A+L L+Y  G R+ E +DLTP+      P T +++ GKG 
Sbjct: 159 A--QLAEEPWIAAR----NAAVLTLLYGCGLRIAEALDLTPA--DFSGPVTSLRVTGKGG 210

Query: 189 KARLVPMLDAQTVHLKNYLK--EYELDSPSAKLYPLFSNSKKEKLTRAGINYIIQKYVGM 246
           K R+VPM+ A    ++ Y K   Y ++       P+F  ++  KL  A    IIQ+   M
Sbjct: 211 KTRIVPMIAAAAEAVETYRKLCPYHIEPEE----PIFRGARGAKLQPA----IIQRE--M 260

Query: 247 ARKENKLMIPLKITCHSFRHTKAMHLLQAGVNLVYIRDILGHVSVQTTEIYARADSKQKR 306
            +    L +P   T H+ RH+ A HLL  G +L  I+++LGH S+ TT++Y   DS +  
Sbjct: 261 QKLRAALGLPDSATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARLL 320

Query: 307 IALEKAY 313
              ++A+
Sbjct: 321 EIYDRAH 327