Pairwise Alignments

Query, 466 a.a., Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 447 a.a., putative DNA binding domain-containing protein from Methanococcus maripaludis S2

 Score =  145 bits (366), Expect = 3e-39
 Identities = 143/474 (30%), Positives = 228/474 (48%), Gaps = 59/474 (12%)

Query: 5   DQIQKGESKTLELKESLPKNESIAKTIVAFSNTSGGKLIIGVNDQLSIVGIDDSMLFEIQ 64
           D I  GE  TLE KESL  N S+AK I AF+N+ GG +++GV D   I G     L    
Sbjct: 11  DLINTGEGYTLEFKESL--NASLAKEICAFANSDGGHILLGVTDSGDITGYP---LSNQD 65

Query: 65  DKIASIISDSCFPGIIPDIYSVNIEN-KLVLVIEVVRGNQKPYFLKSRGREVGSYVRIGA 123
           D   + I+ +  P      +SVN+E    V+VI V +G  KPY   S G     YVR G+
Sbjct: 66  DARITDIARNMDPS-----FSVNLEKVDNVVVITVPKGENKPY---STGGLY--YVRNGS 115

Query: 124 TNRLADSSTIAELERQKHHISYDEEVYYDLELNK-LDLSPLIDIFKQVG--NPLNNEKL- 179
            ++      + EL +    IS++E    + +L K L+ S L +     G  N L  E L 
Sbjct: 116 QSQKLKREEVIELFKYNGLISFEEIPNKEFDLKKDLNNSALNNFITASGITNKLKKEDLL 175

Query: 180 ENLKLIKTSNDKIYPSNALMVILGKLPHCT----------IKCARFKGTTMETFIDKKEY 229
            NL L+K      +  NA     G L  C           I C  ++GT+    +D+K++
Sbjct: 176 NNLYLLKDG----FLKNA-----GVLYFCNNSTKFFRNAHITCVLYEGTSKSNILDRKDF 226

Query: 230 SGDIFTALENTQNFVLNHINLQAEIKGLYRDEKYEIPVVALREALVKAIIHRDYVNQGRD 289
           S DI++   ++ +++ + +N +  I G  R E+ E+P  A+REALV +I HRDY + G  
Sbjct: 227 SKDIYSNFNDSFDYICSKLNTEYII-GKERVERLELPKEAIREALVNSIAHRDYFSSGH- 284

Query: 290 IKVGIYDDIVNIVSPGSLPNNITMDDIFNGRSEVRNRVLANVFKELGLIEQWGSGINRII 349
           I+V I+ D + I +PG L   ++  ++   RS  RN +LA++     L+E+ GSGI RI 
Sbjct: 285 IQVDIFQDKLEISNPGGLVLGLSYSEL-GKRSIPRNPLLADLMLRSKLVERVGSGIIRIR 343

Query: 350 SACKGYGLQTPIIQEKNDYFDNEFIRPQETSSLKESIEQDQSIRQDHERLRTITNDLEEE 409
            + + YGL       +N YF     R       K+  +   S         + TN +   
Sbjct: 344 ESMESYGLNCEFNVSEN-YFSTVLGR-------KKGFKFPVSF--------SSTNAVSRS 387

Query: 410 KRTILLYLLEKGKISRKEATALLDLKNTKTYEILTEMVAQNLIKKQGKGRATYY 463
            + I L ++E  +I+  E + LL+L ++     +  +    ++K+ G  +  ++
Sbjct: 388 DKIIAL-IMENPEITILEISKLLNLSHSTVRNEIKVLKENGIVKRVGPTKGGHW 440