Pairwise Alignments

Query, 466 a.a., Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 513 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  116 bits (290), Expect = 2e-30
 Identities = 96/345 (27%), Positives = 170/345 (49%), Gaps = 14/345 (4%)

Query: 11  ESKTLELKESLPKNE--SIAKTIVAFSNTSGGKLIIGVNDQLSIVGIDDSMLFEIQDKIA 68
           E    + KE L + +  S  K++ AF+NT GG L  GVND+  IVG+++       D I+
Sbjct: 11  ECSAYDFKEMLERKKVKSWLKSVSAFANTDGGSLFYGVNDEGVIVGLENPQADA--DFIS 68

Query: 69  SIISDSCFPGIIPDIYSVNIENK--LVLVIEVVRGNQKPYFLKSRGREVGSYVRIGATNR 126
            ++     P  +P++  + IE++   +L ++V  G   PY+    G    +YVR+G  + 
Sbjct: 69  EMMKARLDP--VPEVQLIPIEHEGHTLLEVKVKAGTLTPYYYYQDGTRT-AYVRVGNESV 125

Query: 127 LADSSTIAELERQKHHISYDEEVYYDLELNKLDLSPLIDIFK-QVGNPLNNEKLENLKLI 185
             +S  +  L  +  H+++D  +   ++  K     L + F+ Q     N++ LE+  L+
Sbjct: 126 ECNSQQLLSLVLKGTHMTWDS-LPTQVDAGKHSFIILANTFREQTHQEWNDKYLESFGLV 184

Query: 186 KTSNDKIYPSNALMVILGKLPHCTIKCARFKGTTMETFIDKKEYSGDIFTALENTQNFVL 245
            T + K+  +  L V    +    I C R+ G   +  I   E+  ++   L+   +F+ 
Sbjct: 185 -TPDGKLTNAGLLFVDNCTVFQSRIFCTRWTGLYKDDAISSVEHRANLVLLLKYGMDFIK 243

Query: 246 NHINLQAEIKGLYRDEKYEIPVVALREALVKAIIHRDYVNQGRDIKVGIYDDIVNIVSPG 305
           N+          YR    +    A+ E LV  +IHRDY   G ++ + IYDD V +VSPG
Sbjct: 244 NYTMSGWVKMPNYRLNLPDYSDRAIFEGLVNHLIHRDYTIMGGEVHIDIYDDRVELVSPG 303

Query: 306 SLPNNITMD--DIFNGRSEVRNRVLANVFKELGLIEQWGSGINRI 348
           ++ +   +   DI+   S  RN V+A+VF +L  +E+ GSG+ ++
Sbjct: 304 AMLDGTQIQDRDIYKVPSMRRNPVIADVFTQLDYMEKRGSGLRKM 348