Pairwise Alignments

Query, 1009 a.a., Uncharacterized protein conserved in bacteria from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 588 a.a., DNA damage response helicase (yejH or radD) (from data) from Shewanella amazonensis SB2B

 Score = 71.6 bits (174), Expect = 1e-16
 Identities = 53/175 (30%), Positives = 86/175 (49%), Gaps = 23/175 (13%)

Query: 350 ERKLQQTISFNTTFRLREHQEKTVCAA-----EKKQFGIIVAPPGTGKTIIGLQIIANKK 404
           +R+ Q T+    T +LR++Q+  + A        ++  ++V P G GK+++  ++    K
Sbjct: 4   DRRRQPTM----TIKLRDYQQDAIEATLAHFRTSRESALLVLPTGAGKSLVIAELARLAK 59

Query: 405 QPTLIIVHRKQLMAQWLERIQSFMGLRKAEIGRIGQGRAKIGKKVTVAMFQSLAKFLDKP 464
              L++ H K+L+AQ  +++ +  G   A I   G G    G K  VA  QS A      
Sbjct: 60  GRVLVLTHVKELVAQNAQKVDALAG--NASIFSAGLGEKDSGGKTVVAGIQSAA-----V 112

Query: 465 ESSEYYDAFGTVIIDECHHISAE---SFRNSLSKL----STFYLYGLTATPFRKG 512
             + + + F  VIIDECH +S +    +R   S+L        L GLTATP+R G
Sbjct: 113 NVAAFDEPFSLVIIDECHRVSLDENSQYRQVFSQLREKNPDLLLLGLTATPYRLG 167