Pairwise Alignments

Query, 1009 a.a., Uncharacterized protein conserved in bacteria from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 579 a.a., type III restriction enzyme, res subunit (RefSeq) from Shewanella loihica PV-4

 Score = 68.6 bits (166), Expect = 1e-15
 Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 19/174 (10%)

Query: 364 RLREHQEKTVCAA-----EKKQFGIIVAPPGTGKTIIGLQIIANKKQPTLIIVHRKQLMA 418
           +LR++Q + V AA           ++V P G GK+I+  ++    K  TL++ H K+L+A
Sbjct: 2   QLRDYQRQAVDAAINHFKRSDDSALLVLPTGAGKSIVIAELARIAKGRTLVLTHVKELVA 61

Query: 419 QWLERIQSFMGLRKAEIGRIGQGRAKIGKKVTVAMFQSLAKFLDKPESSEYYDAFGTVII 478
           Q  E++       +A I   G  +     K  VA  QS  +        ++ + +  VII
Sbjct: 62  QNAEKVGLLTD--EASIFSAGLKQKSTRNKTVVASIQSAVR-----NPKQFDEPYSLVII 114

Query: 479 DECHHISAE---SFRNSLSKLST----FYLYGLTATPFRKGNDGRLIFIYLGDV 525
           DECH +S E    ++  LS L T      L GLTATP+R G+     + Y G +
Sbjct: 115 DECHRVSNEKESQYQQLLSHLRTKNSKLRLLGLTATPYRLGSGWIYRYHYHGKI 168