Pairwise Alignments

Query, 1031 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 866 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  304 bits (778), Expect = 2e-86
 Identities = 221/757 (29%), Positives = 369/757 (48%), Gaps = 80/757 (10%)

Query: 24  QEVTITGTVTTAEDGEPLPGVSVLLQGTNSGTVTDLDGNYSIDVADREGTLVFSYLGYVT 83
           +E  I GTV   ++GEPL GVS+  + +  GT+TD+DGNY +        LVFSY+GY +
Sbjct: 135 KERLIAGTVKD-KNGEPLIGVSIREKSSGEGTITDMDGNYKLSTLSANPVLVFSYVGYQS 193

Query: 84  QTLAIQNRTTIDVVMEEDVSEMGEFVVTAFDIDQSEKSLGYAAQVVESDEITKTKQPNLV 143
           + + ++     +VV+E+   E+ E VVTA  I +SEK+L Y  Q +  DE+T  K  N +
Sbjct: 194 KEVPVKGNVA-NVVLEDATQELNEVVVTALGIKRSEKALSYNVQQLSGDELTTVKDANFI 252

Query: 144 NALQGQVAGVQITNSGGAPGQSARIVIRGINSLDPNANNQPLFVVDGVPINNSTIESGNT 203
           ++L G+VAGV I NS    G ++R+V+RG+ S+   ++N  L+V+DGVP+ N     G  
Sbjct: 253 SSLNGKVAGVNI-NSSNTTGGASRVVMRGVKSI--TSSNLALYVIDGVPMYNMMNGGGGG 309

Query: 204 --PRGMSNRAADINPNDIESMSVLKGAAATALYGVRAANGAVIIRTKRGQAGQTRININS 261
              +  ++ AADINP DIES+S+L G +A ALYG  AA G V+I TK+G A +T + +++
Sbjct: 310 IYDQQGTDGAADINPEDIESISMLTGPSAAALYGNAAAAGVVLITTKKGSADKTSVTVSN 369

Query: 262 SIGMDKLVKLPNLQ----------DQFGQGFSGEYDPSSFWPAWGAPIAEVAETVPGHKY 311
           +    K+  +P +Q          D +G   + +YDP  F                    
Sbjct: 370 NTTFSKVSMMPEMQSKYGNLPNSLDSWGPIVNSDYDPRDF-------------------- 409

Query: 312 QDNWNRAFDTGLNIDNNISFSGGSENATFYGSFGRLDQQGIIPFSDWSR---TTAKLSGS 368
                  F TG N+ N+ + S G++    Y S    +   I+P S ++R   T    +  
Sbjct: 410 -------FQTGANVINSFALSTGNKKNQAYLSASTTNTTNILPNSGYNRYNFTVRNTTSF 462

Query: 369 VKASEKFDFSGSMNFSNS--------------GGNRVPH-DRFMERMMY--WAETQDVRD 411
           +K     D   S    N               G  R P  + F +  M+  +    D+ +
Sbjct: 463 LKDKMTLDAGASYILQNDKNMMSQGYYYNPLPGLYRFPRSENFDDVRMFERYNSGMDLME 522

Query: 412 YINPDGTMKTYGNTNPIYDARFATYEDNVNRIIGNINLNYRPTDWLTLSYRLGTDVSSDS 471
              P G   + G  NP +       E+   R + N +L Y+  DWL +  R+  D + D+
Sbjct: 523 QYWPYGGTSS-GLANPYWIQNRQLRENKKTRYMINASLKYQLFDWLDVVGRVKID-NYDN 580

Query: 472 RTEITPGPKGIDGEVALSSTGFIEETRINARDLTSNFYITLQKQFSGDWNTTLRLGNDIF 531
           R+  T       G +     G   +T   +++  ++   TL K F+ DW+  + LG  + 
Sbjct: 581 RS--TYKAYASTGTLVSGDRGTYSDTSTQSKNTYADAIATLNKSFN-DWSVNVNLGVSLS 637

Query: 532 ERRYDRVVSTGSDFVIPEF--YNLNNTAQIFASQDSQIKRLVGFYGDLTVDYRNFLFINL 589
           + RY+ +   G   +I  F  +N++      A Q     +    + +  + +++ +++  
Sbjct: 638 DSRYEMIGYEGGLKLINFFAVHNIDFNKAWKAKQSGWHDQTRAIFANAEIGWKSMIYLTA 697

Query: 590 TGRNDISSTLP-KDNNSFFYPSVNLSYVFSENMDMPSWFTFGKIRASWAQVGKDTQPHIL 648
           TGRND  S L   D  SFFYPS+ LS + +   + P W T+ K+R S+ +VG        
Sbjct: 698 TGRNDWDSRLAFSDYKSFFYPSIGLSAILTSMFNAPDWLTYLKVRGSYTEVGNSY----- 752

Query: 649 GATFVSPSVFPLNGQV-GFSRNSTFGDPGLKPELTTSIEFGTQLSFLDGRLDLDVTYFKS 707
              F++   +P + Q   ++  S++ +  LKPE T S E G     L+  + L++TY++S
Sbjct: 753 -GRFMTTVTYPYDEQTQSWTSTSSYPNTKLKPERTKSWEVGLDARILND-ISLNLTYYRS 810

Query: 708 NSKDMIIPVPISDATGFSSYITNAGEIQNSGIELVVG 744
           N+ +      +S ++G+S+    +G I N G+E+ +G
Sbjct: 811 NTYNQTFYADLSLSSGYSNIPIQSGNIMNEGLEMSLG 847