Pairwise Alignments

Query, 335 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Pseudomonas fluorescens FW300-N2E2

 Score =  161 bits (408), Expect = 2e-44
 Identities = 93/295 (31%), Positives = 166/295 (56%), Gaps = 9/295 (3%)

Query: 46  KHPVHEAMLYMAKRLEEKSDGKLTMKVYPNAQLGNERELVELLQIGSLGMTKVSSAVMES 105
           +HP  +     A  L EKS GK+ ++++P   LG + + V  LQ G+L +T ++S ++ +
Sbjct: 43  EHPQGQGAQKFADLLSEKSGGKIKVRLFPGGTLGGDVQTVSALQGGTLDITVLNSGILAA 102

Query: 106 FAPKIQVLSQPYLFRDNGHRERVLNGEIGKRLLNEGTQFWLKGLCFYDAGSRSFYTKDKP 165
            AP   +L  P+LF +      V++G +G++L  +     L  L ++D G R+      P
Sbjct: 103 QAPDYAMLDFPFLFNNVEEAHAVIDGPVGQKLAVQLDSKGLVALGYWDLGFRNLTNSKHP 162

Query: 166 VESPEDLVGKKIRVMESNTAINMVNSFGGSPTPVSWGELYTALQQGIVDGAENNPPSVIS 225
           V   ED+ G KIRV++S   +   ++ G +P P+++ E+YT L+Q  +DG EN    +  
Sbjct: 163 VTKLEDMQGLKIRVIQSPIYLETFSALGANPVPMAFPEVYTGLEQHTIDGQENPFTVIEG 222

Query: 226 SRHYEICKFYSLDEHTAVPDMLIVSTKVWDRLSEEEQNWLQEAADESAKFQYKIWAEAEE 285
           ++ YE+ K+ S+  H   P  LI+S K W+RL+++E+  ++ AA E+ KFQ ++ A + +
Sbjct: 223 NKFYEVQKYLSVTGHIFNPQSLIISQKTWNRLNDDEKAMIRSAATEAQKFQREVTAASMD 282

Query: 286 ESMRQLEAEGVT---ITRPDKEPFRKAVEPMYEQIKQS-----QPEMYEIIEKIR 332
           ++   L A  +T   +T  +K+ FR+ V+P+ ++  +S        MYE I K+R
Sbjct: 283 KAKVTL-AGAMTVNEVTPAEKDRFRERVKPVVDKFAKSLDADLVKTMYEEIAKVR 336