Pairwise Alignments

Query, 335 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 332 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Xanthomonas campestris pv. campestris strain 8004

 Score =  193 bits (490), Expect = 6e-54
 Identities = 97/287 (33%), Positives = 167/287 (58%), Gaps = 1/287 (0%)

Query: 47  HPVHEAMLYMAKRLEEKSDGKLTMKVYPNAQLGNERELVELLQIGSLGMTKVSSAVMESF 106
           +P  EA+ +  K+LE +++G+L ++ Y + QLG E E +++ + G++ +T+V S  + + 
Sbjct: 45  YPTVEAVRWFGKQLEARTNGRLKLRQYHSGQLGRESEAIDMARFGAIDITRVYSGALNNT 104

Query: 107 APKIQVLSQPYLFRDNGHRERVLNGEIGKRLLNEGTQFWLKGLCFYDAGSRSFYTKDKPV 166
            P  Q L  PY+F    H  R ++G +G  +L    Q  L GL  YD+G+R FY    P+
Sbjct: 105 FPLTQALCLPYVFDSVPHLRRAIDGHVGDSVLRSFEQRDLVGLAIYDSGARCFYNTKHPL 164

Query: 167 ESPEDLVGKKIRVMESNTAINMVNSFGGSPTPVSWGELYTALQQGIVDGAENNPPSVISS 226
             PEDL G K+RV  S+  + ++   G +PTP+S GE ++A++  ++DGAENN  S  SS
Sbjct: 165 HRPEDLKGLKLRVASSDIFLKLMRMLGANPTPMSLGETFSAMETHMIDGAENNMRSFQSS 224

Query: 227 RHYEICKFYSLDEHTAVPDMLIVSTKVWDRLSEEEQNWLQEAADESAKFQYKIWAEAEEE 286
           RH+E  +++S  EH+  PD+L++S K ++ LS  ++  + E A  S      +W  +E  
Sbjct: 225 RHFEAARYWSQSEHSYAPDILVMSRKSFESLSPADRGLVVELARASVPVMRTLWDASEAT 284

Query: 287 SMRQLEAEGVTITRPDKEPFRKAVEPMYEQIKQSQPEMYEIIEKIRN 333
           + +Q+   GV + + D   FR A  P+  + ++ QPE+  +  +IR+
Sbjct: 285 ARQQVIDYGVKLNQVDMPAFRAAAAPLLAEYRR-QPEIEALYRRIRD 330