Pairwise Alignments

Query, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 557 a.a., RNA helicase from Pseudomonas fluorescens FW300-N2E3

 Score =  273 bits (699), Expect = 8e-78
 Identities = 152/375 (40%), Positives = 225/375 (60%), Gaps = 7/375 (1%)

Query: 3   SNNFETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPI 62
           +  F  FN N ++   + A G+ +P+ IQQ++IP I+ G D+I  AQTGTGKTAAF LPI
Sbjct: 5   TGGFAAFNLNPNILAAVIATGYEEPSAIQQQSIPIIMAGHDMIGQAQTGTGKTAAFALPI 64

Query: 63  LHKIAEKGDNQFNTLIIAPTRELAIQIDQQIQGLA-YFVGVSSIAIYGGGDGLVWEQQKK 121
           LH+I +    +   LI+APTRELA+Q+    +  A    GV+ +A+YGG        Q K
Sbjct: 65  LHRI-DPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAP---MGPQLK 120

Query: 122 ALEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLPKN 181
           A+ +G +IVVATPGRL   L   +  L T+ HLVLDEAD ML +GF DD+  I   LP  
Sbjct: 121 AIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKALPAT 180

Query: 182 RQTVLFSATMPPKIRQFSKKIVTDPHEINIAI-SKTAEGVTQRIYMAHDSQKESLLEHIL 240
           RQTVLFSAT+P  IR  +++ + DP  + I   ++T   + Q   + H  QK S +  +L
Sbjct: 181 RQTVLFSATLPQSIRAIAERHLRDPQHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL 240

Query: 241 TQKNYEAVIVFASTKDKVKSIFKTLKKK-FKVEAFHSDLSQEERETIMSNFKNKTLKILI 299
             ++++A+I+F  TK     +   L+ K +K  A + D++Q +RE ++ + K+  L I++
Sbjct: 241 EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV 300

Query: 300 GTDIISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNEKDLFKLHKT 359
            TD+ +RG+DV  I  V N D P DPE YVHR+GRT RA ++G A+  V  ++   L   
Sbjct: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI 360

Query: 360 QNLIGLEIPRVDLPE 374
           + + G ++  V LP+
Sbjct: 361 ERVTGQKVAEVRLPD 375