Pairwise Alignments

Query, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 473 a.a., DEAD/DEAH box helicase from Rhodopseudomonas palustris CGA009

 Score =  273 bits (697), Expect = 1e-77
 Identities = 164/466 (35%), Positives = 248/466 (53%), Gaps = 31/466 (6%)

Query: 5   NFETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPILH 64
           +F+ F   + +   L    ++ PTPIQ + IP  L G+D++  AQTGTGKTA+F LPILH
Sbjct: 9   SFQEFGLADPIARALQEENYHTPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPILH 68

Query: 65  KIAEK----GDNQFNTLIIAPTRELAIQIDQQIQGLAYFVGVSSIAIYGGGDGLVWEQQK 120
           ++ +            L+++PTREL+ QI          V +S+    GG   +   +Q 
Sbjct: 69  RLLQNRIKPASKTCRVLVLSPTRELSGQILDSFNAYGRHVHLSAALAIGG---VPMGRQV 125

Query: 121 KALEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLPK 180
           ++L  G +++VATPGRL+ L+ G  +KL  +E LVLDEADRMLDMGF +DI KI+  LP 
Sbjct: 126 RSLMGGVDVLVATPGRLLDLVQGNALKLTQVEFLVLDEADRMLDMGFINDIRKIVAKLPI 185

Query: 181 NRQTVLFSATMPPKIRQFSKKIVTDPHEINIA-ISKTAEGVTQRIYMAHDSQKESLLEHI 239
            RQT+ FSATMP  I   +++++ DP  + +  +S T E + QR+     S K + L  I
Sbjct: 186 KRQTLFFSATMPKDIADLAEQMLRDPARVAVTPVSSTVERINQRVIQLDHSAKPAALAQI 245

Query: 240 LTQKNYEAVIVFASTKDKVKSIFKTLKKK-FKVEAFHSDLSQEERETIMSNFKNKTLKIL 298
           L        +VF  TK     + K L +     +A H + SQ  RE +++ F+   L+ L
Sbjct: 246 LKDDKVNQALVFTRTKHGADKVVKGLARAGITADAIHGNKSQNYRERVLAAFRTGELRTL 305

Query: 299 IGTDIISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNEKDLFKLHK 358
           + TDI +RGIDV+G+  V+N+D P+ PE YVHR+GRTARA   G AI+    +++  L  
Sbjct: 306 VATDIAARGIDVDGVSHVVNFDLPNIPETYVHRIGRTARAGADGTAISLCAGEEMAYLRD 365

Query: 359 TQNLIGLEIPRVDL----PEELGTGPEYREP-------NARKGNAPSKGNFKKGTQKKQK 407
            + LI + +P+ D          T P +R P       + R G+AP++G       K  +
Sbjct: 366 IEKLIKVSLPKEDRRTPGAHAAPTPPPHRGPRQAPHGHSPRNGDAPTRG-------KNHR 418

Query: 408 PRNPRKNVQNKATQTSKDSPKPNAKKPASSSKENGQQSGKFRTRRN 453
            R P      ++  +  ++    A +P       G Q   F  R+N
Sbjct: 419 RRGPAAGPARQSDASRHEA----APRPQHGGNGEGLQGVAFLQRKN 460