Pairwise Alignments

Query, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 408 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  291 bits (744), Expect = 3e-83
 Identities = 166/408 (40%), Positives = 247/408 (60%), Gaps = 16/408 (3%)

Query: 6   FETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPILHK 65
           F   +    LQ+ L+A+ F++ T IQ EAIP +L G DL+A AQTGTGKTAAF LPIL K
Sbjct: 3   FSQLSLPAPLQQALEALAFSEATQIQAEAIPLVLSGVDLMASAQTGTGKTAAFALPILAK 62

Query: 66  I-----AEKGDNQFNTLIIAPTRELAIQIDQQIQGLAYFVGVSSIAIYGGGDGLVWEQQK 120
           +     AE  D Q   L++ PTRELA+Q+ Q I   A F  +S+  +YGG   +  E Q 
Sbjct: 63  LMGLAQAEGSDKQPRALVLVPTRELALQVHQGISDFARFTSLSAGLVYGG---VSIEAQC 119

Query: 121 KALEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLPK 180
           + L  G +++VATPGRL+ L   G  KLD +  LV DEADRMLDMGF+D+I +++  LP 
Sbjct: 120 QQLAAGVDLIVATPGRLLDLHRRGAAKLDGVAQLVFDEADRMLDMGFADEIAELMALLPS 179

Query: 181 NRQTVLFSATMPPKIRQFSKKIVTDPHEINIAISKTA-EGVTQRIYMAHDSQKESLLEHI 239
            RQT+LFSAT+  K+   S + +  P  I ++   +A + V QR+Y     +K +LL H+
Sbjct: 180 ERQTLLFSATLDDKVLALSHRWLKQPKRIAVSPQNSASQDVEQRVYAVDSERKFALLSHL 239

Query: 240 LTQKNYEAVIVFASTKDKVKSIFKTL-KKKFKVEAFHSDLSQEERETIMSNFKNKTLKIL 298
           + + +++ V+VF+  K     +   L ++    +AFH DL Q  RE ++++F+   +K+L
Sbjct: 240 INKGDWQRVLVFSRKKVAADKLAARLCEQGIMAKAFHGDLGQGAREQVLADFRRGEIKVL 299

Query: 299 IGTDIISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNEKDLFKLHK 358
           + TD+ +RGID+E ++ V+NY+ P   +DYVHR+GRT RA K+G A+T   E+D   L +
Sbjct: 300 VATDVAARGIDIESLDYVVNYELPYVAQDYVHRIGRTGRAGKQGVAVTLYCEEDALLLEE 359

Query: 359 TQNLIGLEIPRVDLPEELGTGPEY--REPNARK-GNAPSKGNFKKGTQ 403
            + L+   +P+  LP   G  P+    +PN R+ G A  K   K+  Q
Sbjct: 360 IEALLDKRLPQQWLP---GFEPDLTKADPNPRRNGKAAQKRRAKRRGQ 404