Pairwise Alignments

Query, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 451 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  286 bits (733), Expect = 7e-82
 Identities = 166/448 (37%), Positives = 255/448 (56%), Gaps = 13/448 (2%)

Query: 5   NFETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPILH 64
           NF+    +  L +   A G+   T +Q + IP  L G+DL+ACAQTGTGKTAAF   +L 
Sbjct: 2   NFDALPLDPLLAQAAKACGYETLTQVQAKVIPTALAGRDLMACAQTGTGKTAAFSFVLLQ 61

Query: 65  KIAE--KGDNQFNTLIIAPTRELAIQIDQQIQGLAYFVGVSSIAIYGGGDGLVWEQQKKA 122
           ++    +   Q + LI+ PTRELAIQ+   I   + F  ++++A+YGG +      Q+KA
Sbjct: 62  RLLNQPRAIGQLSALILTPTRELAIQVADSISRYSQFTELTTLAVYGGAN---INPQRKA 118

Query: 123 LEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLPKNR 182
           L  G +I+VATPGRL  LL    + L+T++ L++DEADRMLDMGF  DI +    L  + 
Sbjct: 119 LARGVDILVATPGRLFDLLGQHDLSLETVDQLIVDEADRMLDMGFVRDIERTKRLLCVSH 178

Query: 183 QTVLFSATMPPKIRQFSKKIVTDPHEINIAISKTAEGVTQRIYMAHDSQKESLLEHILTQ 242
            T+LFSAT  P+++  + K++ +P  IN+  + +   + Q+IY     +K  LL  ++ +
Sbjct: 179 STMLFSATFTPEVKALATKMLDNPEWINVTSASSGPQIEQKIYPLDARRKAELLAELIGR 238

Query: 243 KNYEAVIVFASTKDKVKSIFKTLK-KKFKVEAFHSDLSQEERETIMSNFKNKTLKILIGT 301
            N++ V+VF +TK+  + + + LK    K   FH D +Q  R   +  FK   L++L+ T
Sbjct: 239 NNWQQVLVFVNTKESAERLHRELKLDGIKNAVFHGDKTQGARNRALEQFKAGELRVLVAT 298

Query: 302 DIISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNEKDLFKLHKTQN 361
           D+ +RG+D+  + LVIN + P +P+DYVHR+GRT RA   G +I+FV ++D   L   + 
Sbjct: 299 DVAARGLDITALPLVINLELPDEPQDYVHRIGRTGRAGLSGVSISFVAKQDETALGAIEA 358

Query: 362 LIGLEIPRVDLP-EELGT--GPEYREPNAR---KGNAPSKGNFKK-GTQKKQKPRNPRKN 414
           LIG  +PR   P  E+G      YRE + R   K   P +G  +K G+Q  ++ ++  K 
Sbjct: 359 LIGKTLPREVQPGYEMGAPLPARYRELDTRVTSKAAQPKRGKGQKFGSQDGRRGQSRAKA 418

Query: 415 VQNKATQTSKDSPKPNAKKPASSSKENG 442
            Q KA Q    S K +  K    S + G
Sbjct: 419 PQRKAPQRKTSSDKASNDKARRPSSDKG 446