Pairwise Alignments

Query, 456 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 510 a.a., ATP-dependent RNA helicase RhlE from Paraburkholderia bryophila 376MFSha3.1

 Score =  276 bits (707), Expect = 9e-79
 Identities = 177/470 (37%), Positives = 254/470 (54%), Gaps = 45/470 (9%)

Query: 5   NFETFNFNESLQEGLDAMGFNKPTPIQQEAIPEILKGKDLIACAQTGTGKTAAFILPILH 64
           +F++   +E L   +  +G+  PTPIQ +AIP +L G DL+A AQTGTGKTA F LPIL 
Sbjct: 2   SFDSLGLSEPLVRAVHELGYTTPTPIQTQAIPAVLNGGDLLAGAQTGTGKTAGFTLPILQ 61

Query: 65  KI-------AEKGDNQFNTLIIAPTRELAIQIDQQIQGLAYFVGVSSIAIYGGGDGLVWE 117
           ++       +  G      LI+ PTRELA Q+++ ++    ++ + S  ++GG   +   
Sbjct: 62  RLNSMPPHASASGKRAVRALILTPTRELAAQVEESVRAYGKYLKLKSTVMFGG---VGIN 118

Query: 118 QQKKALEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINY 177
            Q  AL  G +IVVATPGRL+  +    I L  LE LVLDEADRMLDMGF  DI +++  
Sbjct: 119 PQIGALRSGVDIVVATPGRLLDHMQQKTIDLSHLEILVLDEADRMLDMGFIHDIKRVLAK 178

Query: 178 LPKNRQTVLFSATMPPKIRQFSKKIVTDPHEINIAI-SKTAEGVTQRIYMAHDSQKESLL 236
           LP  RQ +LFSAT   +I+  +  ++  P  I +A  + TAE V Q+I+     +K  LL
Sbjct: 179 LPPKRQNLLFSATFSDEIKTLADNLLDSPALIEVARRNTTAETVAQKIHPVDRDKKRELL 238

Query: 237 EHILTQKNYEAVIVFASTKDKVKSIFKTLKKK-FKVEAFHSDLSQEERETIMSNFKNKTL 295
            H++ Q N+  V+VF  TK     + + L K      A H + SQ  R   ++ FK+ TL
Sbjct: 239 THLIKQHNWFQVLVFTRTKHGANRLAEQLTKDGISALAIHGNKSQSARTRALAEFKDGTL 298

Query: 296 KILIGTDIISRGIDVEGIELVINYDTPSDPEDYVHRVGRTARADKKGEAITFVNE----- 350
           ++L+ TDI +RGID++ +  V+N+D P+ PEDYVHR+GRT RA   GEAI+ V       
Sbjct: 299 QVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAISLVCVDELQL 358

Query: 351 -KDLFKLHK----TQNLIGLEIPRVDLPEEL-----GTGPEYREPNARKGNAPSKGN--- 397
            KD+ KL K     + ++G E      PE +     G G   R P  +   A   GN   
Sbjct: 359 LKDIEKLIKRPVPQEVIVGFEPDPTAKPEPILRRGQGGGGGGRSPRQQGQGAAKAGNGGA 418

Query: 398 FKKGTQKKQKPRNPRKNVQNKATQTSKDSPKPNAKKPASS---SKENGQQ 444
            K   +  Q+P N             +  PKP A KPA +   S+ +GQ+
Sbjct: 419 AKPAQRSGQRPAN------------GQQQPKPQAAKPAGNGGQSRRDGQR 456