Pairwise Alignments

Query, 199 a.a., hypothetical protein from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 49.7 bits (117), Expect = 7e-11
 Identities = 35/149 (23%), Positives = 68/149 (45%)

Query: 27  GDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKDFEAGFKQDDK 86
           GD   K G++ EAI  Y++ L+ KP+  E L  +G A   +    +A + +E   K    
Sbjct: 118 GDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPY 177

Query: 87  NLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMAYFMKARALHQLGNTEEAMKEYT 146
           + ++   + N +     +E+++ + +               K  AL +LG T EA+  YT
Sbjct: 178 DTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYT 237

Query: 147 AAIDQDKEFGQAYYYRGVLKYATKKQRSA 175
             +++  +  + +   G+L Y T+   +A
Sbjct: 238 KVLEKHIQNYEPWCRVGLLYYDTEDYETA 266



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 33/159 (20%), Positives = 69/159 (43%)

Query: 27  GDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKDFEAGFKQDDK 86
           G+  +   +Y++AI+ Y   L     D     S+G A  ++G   +A   +    ++  +
Sbjct: 186 GNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQ 245

Query: 87  NLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMAYFMKARALHQLGNTEEAMKEYT 146
           N +    +  LY    ++E ++ Y E A               R   +L N  + ++   
Sbjct: 246 NYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFME 305

Query: 147 AAIDQDKEFGQAYYYRGVLKYATKKQRSACTDFKKSASL 185
            A+D+D E+ +A+ Y+G +    ++   A   +KK+ S+
Sbjct: 306 KALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISI 344



 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 5/137 (3%)

Query: 22  KGD-----SKGDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKD 76
           KGD     SKGD L K G+  EA+++Y+  L+   ++ E     G  Y +  D   A   
Sbjct: 210 KGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYY 269

Query: 77  FEAGFKQDDKNLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMAYFMKARALHQLG 136
            E   +++  N  +L+ L   Y K  N+ + L + E A       A A+  K   L+ L 
Sbjct: 270 LELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLE 329

Query: 137 NTEEAMKEYTAAIDQDK 153
              EA+  Y  AI  +K
Sbjct: 330 RHYEAIDCYKKAISINK 346



 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 32/155 (20%), Positives = 67/155 (43%), Gaps = 3/155 (1%)

Query: 27  GDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKDFEAGFKQDDK 86
           G   +  G+YQ++IE ++  L ++PK+ +A Y +G AY  +G    A+  +E        
Sbjct: 19  GTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPN 78

Query: 87  NLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMAYFMKARALHQLGNTEEAMKEYT 146
           +L+++ + + L       + S+   E    V  +      +   A  + G   EA+ +Y 
Sbjct: 79  DLEIIKSYTMLLNSLELFKESV---EILKNVSESDDKIIEILGDAYLKTGKFNEAILQYN 135

Query: 147 AAIDQDKEFGQAYYYRGVLKYATKKQRSACTDFKK 181
             +++   + +    +G      KK   A   ++K
Sbjct: 136 NILERKPRYKEILAKKGTALVGLKKFDEALEIYEK 170



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 7/152 (4%)

Query: 26  KGDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKDFEAGFKQDD 85
           KG+     G+ + A + Y   L  +P D+E + S       +    ++ +  +   + DD
Sbjct: 52  KGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSESDD 111

Query: 86  KNLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMAYFM--KARALHQLGNTEEAMK 143
           K +++   L + Y K G    ++L  +Y   +   P     +  K  AL  L   +EA++
Sbjct: 112 KIIEI---LGDAYLKTGKFNEAIL--QYNNILERKPRYKEILAKKGTALVGLKKFDEALE 166

Query: 144 EYTAAIDQDKEFGQAYYYRGVLKYATKKQRSA 175
            Y   +       + +   G   Y  KK   A
Sbjct: 167 IYEKVLKISPYDTEVWKNIGNAFYTVKKYEKA 198