Pairwise Alignments

Query, 199 a.a., hypothetical protein from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 39/166 (23%), Positives = 69/166 (41%)

Query: 20  SEKGDSKGDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKDFEA 79
           SE   +KG TL    +Y EAI+ +   +    K+ +  Y++G    ++G+  K+   +  
Sbjct: 127 SEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNK 186

Query: 80  GFKQDDKNLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMAYFMKARALHQLGNTE 139
               D+K    LL   N Y K  N+E ++     A  +        + KA A     N E
Sbjct: 187 ALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFE 246

Query: 140 EAMKEYTAAIDQDKEFGQAYYYRGVLKYATKKQRSACTDFKKSASL 185
            A+K Y  A++ +         +G+     K   +A ++F  +  L
Sbjct: 247 YALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQL 292



 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 35/173 (20%), Positives = 78/173 (45%), Gaps = 5/173 (2%)

Query: 15  LFSGC-----SEKGDSKGDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGD 69
           L +GC     S+  + KG  L+ QG Y ++I  Y+  L   PK  E   ++G +  ++G 
Sbjct: 15  LMAGCIGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGI 74

Query: 70  LAKAKKDFEAGFKQDDKNLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMAYFMKA 129
             ++ + F+     D +N +    L  +  K GN++++L   + +  +    + A+  K 
Sbjct: 75  YGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKG 134

Query: 130 RALHQLGNTEEAMKEYTAAIDQDKEFGQAYYYRGVLKYATKKQRSACTDFKKS 182
             L+ +    EA+  +  +I  + +    +Y +G  ++   +   +   + K+
Sbjct: 135 ITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKA 187



 Score = 37.0 bits (84), Expect = 4e-07
 Identities = 18/83 (21%), Positives = 42/83 (50%)

Query: 26  KGDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKDFEAGFKQDD 85
           K D       ++ A++ Y + L+  P + + L S+G   +++ + + A  +F+   + D 
Sbjct: 235 KADAYRDTENFEYALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDP 294

Query: 86  KNLKLLLALSNLYQKEGNHERSL 108
           KN+++ +   N Y    ++E S+
Sbjct: 295 KNVQIWILKGNSYVGLKDYESSI 317



 Score = 36.6 bits (83), Expect = 5e-07
 Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 7/124 (5%)

Query: 26  KGDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKDFEAGFKQDD 85
           KG++  K   Y+ AIE ++      PK     Y +  AY +  +   A K ++   + + 
Sbjct: 201 KGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEYALKYYDEALEINP 260

Query: 86  KNLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMAYFMKARALHQLGNTEEAMKEY 145
            N  +L++      K  N+  ++   + A  +       + +K       GN+   +K+Y
Sbjct: 261 SNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILK-------GNSYVGLKDY 313

Query: 146 TAAI 149
            ++I
Sbjct: 314 ESSI 317



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 25  SKGDTLFKQGQYQEAIEVYSDRLKTKPKDVEALYSRGRAYEEVGDLAKAKKDFEAGFKQD 84
           SKG  L K   Y  AI  +   ++  PK+V+    +G +Y  + D   +   ++   + +
Sbjct: 268 SKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYKKALEIE 327

Query: 85  DKN 87
            KN
Sbjct: 328 PKN 330



 Score = 24.6 bits (52), Expect = 0.002
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 12/111 (10%)

Query: 84  DDKNLKLLLALSNLYQKEGNHERSLLYAEYATAVPGAPAMA--YFMKARALHQLGNTEEA 141
           +DK L+L          +GN+  S+  +EY  A+   P  A  +  K  +L +LG   E+
Sbjct: 29  NDKGLELY--------NQGNYVDSI--SEYNLALLENPKSAEIWVNKGNSLLKLGIYGES 78

Query: 142 MKEYTAAIDQDKEFGQAYYYRGVLKYATKKQRSACTDFKKSASLGYAAAEA 192
            + +  A+  D E  +A+   G +   T   + A   + KS ++    +EA
Sbjct: 79  TECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEA 129