Pairwise Alignments

Query, 1005 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 990 a.a., SusC/RagA family protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  420 bits (1079), Expect = e-121
 Identities = 312/1008 (30%), Positives = 489/1008 (48%), Gaps = 99/1008 (9%)

Query: 52   TVTGTVISGEDGLTLPGVSILIKGTTRGVTTDMDGKFSID-IPDEGATLVFSFIGFA--Q 108
            +V+G V+  E GL LPG S+++KGTTR  +TD +G + +  + D   TL  SF+G+    
Sbjct: 28   SVSGKVLD-ETGLPLPGASVVVKGTTRSTSTDANGNYKLGGLSDGSITLSASFVGYQTLD 86

Query: 109  QEVEVYTAKDLSITLEPEMTSMTEVVVVGYGTMRKGDVTSSIGGVKEEDFVKGAVRDAAQ 168
            + V +     ++  L P+   + EVVV+GYGT  K ++T SI  V  +DF KGA+    Q
Sbjct: 87   KAVSISANATVNFQLVPDAQKLNEVVVIGYGTAEKKNLTGSITTVSAKDFQKGAITTPEQ 146

Query: 169  LVQGKVAGLRVTTPSGDPGASTQINLRGINSINGTSNPLILIDGVPGDLNTVP------- 221
            L+QGKVAG+ + + SG PG  +QI +RG  S+N +++PL++IDGVP   NT+        
Sbjct: 147  LIQGKVAGVNIISNSGQPGVGSQIRIRGGASLNASNDPLVVIDGVPFSGNTIDNAPSPLS 206

Query: 222  ---PEDIESVDVLKDGSAAAIYGTRATGGVILITTKKNSGGNRNSINYNTYVSLQTIARK 278
               P DIE+  VLKD +A AIYG+RA+ GVILITTKK  G     IN++T  S+ T+ARK
Sbjct: 207  LINPNDIETFTVLKDANATAIYGSRASNGVILITTKK-GGSGAPVINFSTNNSIATVARK 265

Query: 279  PELLTGDDYRRLIDEEGIAYTDY---GGNTDWVDEMTRNPISQNHNLSFSGGDRKTNFTA 335
             ++L+ D  R  ++  G A         NTDW D + +   + ++NLS +G  +   +  
Sbjct: 266  VDVLSADQVRAYVNANGNATQKALLGTANTDWQDAIYQRAFTSDNNLSIAGSFKGVPYRV 325

Query: 336  SLNYRNWQGIFLRSNQERFNIRADLNHSMFDDKLRANFQIINRVFTREEGGADGYAYRQA 395
            S  Y +  G+ +    +R      L+  +F D L+ +  +   +   +   A+  A   A
Sbjct: 326  SAGYLDQDGLLITDKLKRGTGSITLSPRLFKDHLKIDLNLKGSL--TDSHFANAGAINSA 383

Query: 396  IIRNPTDQVRTEDG-----GWQERDGYFY-------ENPISRIYEADSESKFKEMRVNGS 443
            I  +PT  +  ++       W +  G           NP++ I   D+         N  
Sbjct: 384  IQFDPTQPIYADNKYGNYFEWTQGTGSAMVPNPNAPRNPVALIRLQDNNGNAARSVGNAK 443

Query: 444  LNYN------PIDNLDIKLMVSNVQNS-NLTGYATSFQHTNTRLNNQNGTASRSTSAYNE 496
             +Y+         NL++   VS    S  +  YA     T       +G+ SR+     +
Sbjct: 444  FDYSFHFLPELHANLNLGYDVSKGYGSIAVPTYAAQSAAT-------SGSFSRALKTEAD 496

Query: 497  NLLEFTTNYNKAVGD--HYFTLLGGYSWQDATYEDFNASNWDFPTDLYKWNNLGAGGALQ 554
               EF  NY   V      F +  GY + D     +N +N+            G G  + 
Sbjct: 497  KFSEFYLNYAHTVESIKSRFDVTAGYGYYDIATTGYNFTNY-----------TGLGVPIV 545

Query: 555  AGQAGMGSSKNKWQLAGFFGRATYSYHEKYLFMASVRREGSSRFGENSQWGTFPAVSVGW 614
                     +NK  +  ++GR  Y+  +KY+  A++R + SS+F E+++WG FP+V   W
Sbjct: 546  TPVFPFSVERNK--MLSYYGRFNYTLADKYILSATMRADASSKFAESNRWGYFPSVGFTW 603

Query: 615  RISNEPFLKNSKNIGEIKLRAGFGVTGT-----IANSPYLSQISYDFTRAQGAY-IGGQW 668
            RI  E FLK+SK + ++KLR  +G TG      I N  Y+++  Y  +   G Y IG  +
Sbjct: 604  RIIGENFLKDSKVLSDLKLRLSYGETGNKDGADIGNYNYIAK--YYASSNTGQYQIGNTF 661

Query: 669  VQGFIPARNFNPDLRWERKEEYNFGVDYSFFNDRLSGSIDVYRRDIKDLLYNFPVPVPPY 728
               + PA  ++PDLRWE    YN G+DY F   RL GSIDVY +   DLL    +PV   
Sbjct: 662  YNYYAPA-GYDPDLRWETTTTYNAGLDYGFLGGRLYGSIDVYYKKTADLLSKITIPVGTN 720

Query: 729  LTNSMTINAGVLQNDGIEVLVNVVPIQKKDFSWNTSITYSTNRNKLVSLS---NDQFEAT 785
             +N +  N G +   G EV +N   ++ ++ +W+  +  S N+ K+ +L+   N  F+  
Sbjct: 721  FSNELVTNVGNMDVKGAEVSLNFTAVKTENTTWDFGVNASYNKRKVTNLTLNPNSGFKID 780

Query: 786  NDFFTAGYTGEPIQDYTHRVEVGGAIGRFYVWKTV----GTTEDGEWLIENQAGENIPIS 841
                + G TG  ++ Y     V      ++V+K V    G   +G +   N  G      
Sbjct: 781  AGDISGG-TGIHLK-YN---AVNQIPQSYFVYKQVYDAGGKPLEGVYQDLNGDG------ 829

Query: 842  EASQEDRQYYGNGIPLHILGFNNSLRFKNFDMQANFRGAFGHEIL-NFQRMF-YENPYNP 899
              + +D+ +Y +  P    GFN S  +K + +    R + G+ +  N    F  ++    
Sbjct: 830  TITTDDQYFYKSPDPQFTFGFNTSFTYKKWSVNTVLRASLGNYVYDNVSSNFGIKSNLLS 889

Query: 900  AYNMLKTAYDPVYGNRLNSDLALVSHYIEDGDYFKLDNLTIGYTIPKLGFLRNA--RVYA 957
            +  +L  A   +      +   L  +YI++  + K+DNL + Y I KL     A  R+ A
Sbjct: 890  SVGILNNASSDILNTGFTNTQYLSDYYIKNASFLKMDNLGLAYNIGKLSKDGTATMRISA 949

Query: 958  SGLNLFTITKYKGIDPEGVSITGFDPGNDQRDKYPTTRTYTLGLNVTF 1005
            +  N+F +TKYKG+DPE    TG D      + YP  RTYTLGLNV F
Sbjct: 950  NCQNVFVVTKYKGLDPE--LATGID-----YNLYPRPRTYTLGLNVGF 990