Pairwise Alignments

Query, 1005 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1021 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  440 bits (1132), Expect = e-127
 Identities = 330/1002 (32%), Positives = 484/1002 (48%), Gaps = 79/1002 (7%)

Query: 53   VTGTVISGEDGLTLPGVSILIKGTTRGVTTDMDGKFSIDIPDEGATLVFSFIGFAQQEVE 112
            VTGTV   E GL   G S+       G + D +GKF+I +      L F+ +G+  Q V 
Sbjct: 49   VTGTV-KDEKGLPAVGTSVTETDVKNGTSVDANGKFTITLKGNLKVLNFTLVGYKTQRVT 107

Query: 113  VYTAKDLSITLEPEMTSMTEVVVVGYGTMRKGDVTSSIGGVKEEDF-VKGAVRDAAQLVQ 171
            V  +  +++ LE ++  + EVVVVGYGT R+GD+++SI  VK  +  + G+  +  Q +Q
Sbjct: 108  VGASNVVNVNLEEDLNKLNEVVVVGYGTQRRGDISASISTVKASEMNLGGSTSNIGQAIQ 167

Query: 172  GKVAGLRVTTPSGDPGASTQINLRGINSINGTSNPLILIDG-VPGDLNTVPPEDIESVDV 230
            GK AG++V   S  PGA  QI +RG NSI  +++PL ++DG +  + +T+ P DIE + +
Sbjct: 168  GKAAGVQVQQTSFAPGAGIQITIRGGNSIQSSNSPLYVVDGFISENGSTINPNDIEDIQI 227

Query: 231  LKDGSAAAIYGTRATGGVILITTKKNSGGNRNSINYNTYVSLQTIARKPELLTGDDYRRL 290
            LKD S+AAIYG R   GV+LITTKK   G + SI+ +     Q +  KPELLTG  Y   
Sbjct: 228  LKDASSAAIYGARGGNGVVLITTKKGKMG-KVSIDADYSTGRQFLTYKPELLTGQQY--- 283

Query: 291  IDEEGIAYTDYG-----------GNTDWVDEMTRNPISQNHNLSFSGGDRKTNFTASLNY 339
             D +   Y + G            NT+W+ E T+N I  N N+S S GD  +    S NY
Sbjct: 284  TDIQNATYAENGKSPLFPASFIPTNTNWLSEATQNSIVDNMNVSISSGDANSKLYVSGNY 343

Query: 340  RNWQGIFLRSNQERFNIRADLNHSMFDD-KLRANFQIINRVFTREEGGADGYA--YRQAI 396
             +  G+   +   R+  R   +  + +  +L ANF   +   ++++   DG        I
Sbjct: 344  IDQVGVLKSTGFTRYTARIGADKKLNERVRLNANFYGASSK-SKQQSYGDGITPPLFGII 402

Query: 397  IRNPTDQVRTEDGGWQERDGYFYENPISRIYEADSESKFKEMRVNGSLNYNPIDNLDIKL 456
               P   V   DG +    G    N I+ + E  +    K    N  L+Y  I NL   L
Sbjct: 403  TSLPNLPVYNADGSYYNYLG--KSNAIANLLEPTNNRDNKLANANVGLDYEVIKNLTYHL 460

Query: 457  MVSNVQNSNLTGYATSFQHTNTRLNNQNGTASRSTSAYNENLLEFTTNYNKAVGDHYFTL 516
                    + T   T    T        G AS ++S+    L+E    Y     DH FTL
Sbjct: 461  GAGG--EFSQTDLGTYTPQTIPAGVANKGLASITSSSTFRWLIENYLTYKYKFNDHDFTL 518

Query: 517  LGGYSWQDATYEDFNASNWDFPTDLYKWNNLGAGGALQAGQAGMGSSKNKWQLAGFFGRA 576
            LGG S Q    +  N  +  F TD + + NL AG    A   G GS+K +     +F R 
Sbjct: 519  LGGVSAQKDVAQSVNVGSKGFSTDQFLYYNLTAG----ALPNGYGSNKTQTSFNSYFARL 574

Query: 577  TYSYHEKYLFMASVRREGSSRFGENSQWGTFPAVSVGWRISNEPFLKNSKNIGEIKLRAG 636
             Y++ +K L   + R + SS+FGEN++ G FP+ S+ ++ ++E F+KN      +K R  
Sbjct: 575  NYAFKDKLLAAFTFRGDASSKFGENNRRGYFPSGSLAYKFTDEDFIKNLNTFSNLKARVS 634

Query: 637  FGVTGT--IANSPYLSQI-SYDFT-RAQGAYIGGQWVQGFIPARNF-NPDLRWERKEEYN 691
            +GVTG   I +  YL+Q  SY+    A G  + G      I A+N  NPDL+WE   + N
Sbjct: 635  YGVTGNDRILDYAYLAQFGSYNTAIDADGGLVSG------IEAKNLANPDLKWESTAQLN 688

Query: 692  FGVDYSFFNDRLSGSIDVYRRDIKDLLYNFPVPVPPYLTNSMTI-NAGVLQNDGIEVLVN 750
             GVD  FFN RL+ SID Y +   DLL N  VPV  Y   ++ + NAG L+N GIE+ VN
Sbjct: 689  AGVDMGFFNGRLNVSIDYYNKKTTDLLLN--VPVGNYYGQTIQLANAGSLRNQGIELAVN 746

Query: 751  VVPIQKKDFSWNTSITYSTNRNKLVSLSNDQFEATNDFFTAGYTGEPIQDYTHRVEVGGA 810
               I    F+WN++   S NR K++SL  DQ +      TA  +G        RV  G  
Sbjct: 747  TTNIASPAFNWNSTFNISYNRQKVLSL-GDQID-NIPVNTANPSGTVSGREFTRVLPGRE 804

Query: 811  IGRFYVWKTVGTTEDGEWLIENQAGENIPISEA--------SQEDRQYYGNGIPLHILGF 862
            +G    +   G  + GE      A +      A        + +D+QY GN  P    G 
Sbjct: 805  LGELRGYVYAGVIKSGEVYAPQPAAKPGDPKYADINGDGAITPDDQQYLGNTTPRFSTGL 864

Query: 863  NNSLRFKNFDMQANFRGAFGHEILNFQRMFYENPYN-PAYNMLKTAYDPVYGNRLNSDLA 921
             N   FK F++   F+GAFG+ + N  R+  E+     A N        V G   N+D+ 
Sbjct: 865  ANDFSFKGFNLNVFFQGAFGYYLYNMNRLVLESTTGADALNRF------VAGKNENTDIP 918

Query: 922  ------------LVSHYIEDGDYFKLDNLTIGYTIP-----KLGFLRNARVYASGLNLFT 964
                        + S ++E+  Y +L ++++GY+IP     K   +    VY    NLFT
Sbjct: 919  REGYFLSQYGGYVNSRFVENAAYVRLKSVSLGYSIPASLFSKTKLISGLNVYVQAQNLFT 978

Query: 965  ITKYKGIDPEGVSITGFDPGND-QRDKYPTTRTYTLGLNVTF 1005
            ITKY G DPE  + +G + G     + +P  +T T G+  +F
Sbjct: 979  ITKYTGTDPEVNTHSGSNTGGGLDFNAFPAFKTVTFGIKASF 1020