Pairwise Alignments

Query, 1005 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1012 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  583 bits (1502), Expect = e-170
 Identities = 347/977 (35%), Positives = 538/977 (55%), Gaps = 39/977 (3%)

Query: 53   VTGTVISGEDGLTLPGVSILIKGTTRGVTTDMDGKFSIDIPDEGATLVFSFIGFAQQEVE 112
            V GTV+  E+G  +PGV I    + +G  TD+ GKF+I+    G  +  S++G+  Q + 
Sbjct: 51   VAGTVVD-ENGQPVPGVGIKNITSGKGAVTDVAGKFTIEA-STGDVIRISYVGYLTQNIT 108

Query: 113  VYTAKDLSITLEPEM-TSMTEVVVVGYGTMRKGDVTSSIGGVKEEDFVKGAVRDAAQLVQ 171
            +     L+I L     T + +VVVVGYG+  + ++TS+I  V    F +   R+A  L+Q
Sbjct: 109  ITNQNTLNIKLVVSADTKLDDVVVVGYGSRSQRELTSAITKVDTSQFRQSGARNALDLLQ 168

Query: 172  GKVAGLRVTTPSGDPGASTQINLRGINSINGTSNPLILIDGVPG-DLNTVPPEDIESVDV 230
            GKVAGL++T  S +P     I LRG+ SI+GT++PLI+IDG+PG +L+ +  +DIES  V
Sbjct: 169  GKVAGLQITRSSSNPNTGVAIQLRGVTSISGTASPLIVIDGIPGGNLDLLQQDDIESFTV 228

Query: 231  LKDGSAAAIYGTRATGGVILITTKKNSGGNRNSINYNTYVSLQTIARKPELLTGDDYRRL 290
            LKDGSAAAIYGTRA  GVIL+TTKK   G     +YN Y   +T+  +P+ +    +R  
Sbjct: 229  LKDGSAAAIYGTRANAGVILVTTKKGRKGAAQ-FSYNGYAKHETLYERPDFMNATQFREK 287

Query: 291  IDEEGIAYTDYGGNTDWVDEM-TRNPISQNHNLSFSGGDRKTNFTASLNYRNWQGIFLRS 349
            I        DYGG+ ++ D++  ++ ++   NLS SGG  K+N+  S  Y    G    +
Sbjct: 288  IAAGQYTAKDYGGDFNYFDDLINKDNLTNYQNLSVSGGSDKSNYRGSFTYNKLDGFAREN 347

Query: 350  NQERFNIRADLNHSMFDDKLRANFQIINRVFTREEGGADGYAYRQAIIRNPTDQVRTEDG 409
            ++E++  R  L    F DK+ A F + + +      G  G+     + +NPT+     +G
Sbjct: 348  SREQYQFRMSLTQKGFKDKVTAMFNVASNINRANLLGGGGW--EAVLTKNPTESYYNPNG 405

Query: 410  GWQERDGYFYENPISRIYEADSESKFKEMRVNGSLNYNPIDNLDIKLMVSNVQNSNLTGY 469
             +         N I+R+ +  S+   +   V+G ++ + + +L     V+  +N  +   
Sbjct: 406  SYLFTRNI--TNEIARLAQETSKRNQQTYSVDGKIDIDIMKDLKASAFVAYQRNQFVDN- 462

Query: 470  ATSFQHTNTRLNNQNGTASRSTSAY-----NENL-LEFTTNYNKAVGD-HYFTLLGGYSW 522
               ++   ++ + +NG A     AY     NEN   E T  Y+K + D H  T + GYS+
Sbjct: 463  --QYRLLGSQNSVENGDAPGGGYAYKGTELNENFNFEPTIEYSKTIKDKHRLTGMIGYSY 520

Query: 523  QDATYEDFNASNWDFPTDLYKWNNLGAGGALQAGQAGMGSSKNKWQLAGFFGRATYSYHE 582
            +    E F+A+N  +  D+++ NNLG+   +   + G+ S+KN   L   FGR  Y++  
Sbjct: 521  RYEVNESFSANNRGYTNDIFEENNLGSV-PVAVNRIGIASNKNDNTLIALFGRVHYTFDG 579

Query: 583  KYLFMASVRREGSSRFGENSQWGTFPAVSVGWRISNEPFLKNSKNIGEIKLRAGFGVTGT 642
            K  F A +RREGSS+FG N++W +FPAVS  W I+ E F++N+K +  +K+RAG+G TG 
Sbjct: 580  KVNFEAVLRREGSSKFGANNKWASFPAVSASWEITREKFMENAKWLNFLKIRAGYGETGN 639

Query: 643  IANSPYLSQISYDFTRAQGAYIGGQWVQGFIPARNFNPDLRWERKEEYNFGVDYSFFNDR 702
               + Y S ++   T     + GGQW+Q + P+RN NP+LRWERK+EYN G+D++ FN++
Sbjct: 640  SGFANYASLVTLS-TGNLYPFPGGQWLQTYGPSRNPNPNLRWERKKEYNLGLDFAMFNNK 698

Query: 703  LSGSIDVYRRDIKDLLYNFPVPVPPYLTNSMTINAGVLQNDGIEVLVNVVPIQKKDFSWN 762
            LSGS+DV++RDI+DLLY +  P PPY+ +++  N G +   GIE+ ++   I+ KDFSWN
Sbjct: 699  LSGSVDVFKRDIEDLLYTYTSPQPPYVASTIYTNVGTISAKGIELTLSYAAIKNKDFSWN 758

Query: 763  TSITYSTNRNKLVSLSNDQFEATNDFFTAGYTGEPIQDYTHRVEVGGAIGRFYVWKTVGT 822
                 ST  NKLV+ SND+F    + F  G  G        R   G  IG F+  +    
Sbjct: 759  VDFAGSTIDNKLVTFSNDEFRRDMEQF-GGIGGAGDLGNAFRTYEGRNIGEFWGKRFNSF 817

Query: 823  TEDGEWLIENQAGENIPISEAS------QEDRQYYGNGIPLHILGFNNSLRFKNFDMQAN 876
            T DG+WL  N+AG+ +P ++ +      Q D Q  GN IP + L   N+  +K FD++  
Sbjct: 818  TPDGKWLFTNRAGQAVPNAQINTSPFRDQTDLQVIGNAIPKYYLSLGNTFTYKQFDLRIF 877

Query: 877  FRGAFGHEILNFQRMFYENPYNPAYNMLKTAYDPVYGNRLNSDLALVSHYIEDGDYFKLD 936
             R     ++LN   + Y N +    N+L +A+       +N       +Y+E+G + K+D
Sbjct: 878  LRSKLDFDVLNTVALSYGNKFGTQGNLLNSAFTKY--AEINDTYMYSDYYLENGSFLKVD 935

Query: 937  NLTIGYTIP-KLGFLRNARVYASGLNLFTITKYKGIDPE-------GVSITGFDPGNDQR 988
             +T+GYT   K   +R+ R+YA G NL  +T Y G DP+       G  I G   G D R
Sbjct: 936  EVTLGYTFKFKDKAIRSLRLYAVGQNLALLTGYTGNDPDLIQDTGLGQEINGRSLGIDTR 995

Query: 989  DKYPTTRTYTLGLNVTF 1005
              YPTTR++  G+N  F
Sbjct: 996  SPYPTTRSFVFGVNFGF 1012