Pairwise Alignments

Query, 1005 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1028 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  450 bits (1157), Expect = e-130
 Identities = 323/1042 (30%), Positives = 501/1042 (48%), Gaps = 115/1042 (11%)

Query: 52   TVTGTVISGEDGLTLPGVSILIKGTTRGVTTDMDGKFSID-IPDEGATLVFSFIGFAQQE 110
            T+ G V  G+   T+PGV+I +KG+     TD +G++ I  +P +   LVF+++G+  + 
Sbjct: 14   TIIGVVTDGQKQ-TIPGVTIQVKGSKIITQTDEEGRYRIQALPAD--QLVFNYVGYQAET 70

Query: 111  VEVYTAKDLSITLEPEMTSMTEVVVVGYGTMRKGDVTSSIGGVKEEDFVKGAVRDAAQLV 170
            V V     ++ITL+P    +++VVV+GYG+  + D+++SI  VK  DF K  V+   + +
Sbjct: 71   VSVGAKTTINITLKPSSIGLSDVVVIGYGSANRNDLSTSIASVKMSDFEKAPVKSFEEAL 130

Query: 171  QGKVAGLRVTTPSGDPGASTQINLRGINSINGTSNPLILIDGVPGD---LNTVPPEDIES 227
             G+VAG++V    G PGA + I +RG  SI   ++PL +IDG P D    N++ P+DIES
Sbjct: 131  AGRVAGVQVAGSDGQPGAVSNIVIRGAGSITQDNSPLYVIDGFPMDNANNNSINPDDIES 190

Query: 228  VDVLKDGSAAAIYGTRATGGVILITTKKNSGGNRNSINYNTYVSLQTIARKPELLTGDDY 287
            +DVLKD +A AIYG+R   GVI I TK+   G +  + YN Y  LQ   ++  ++   ++
Sbjct: 191  IDVLKDAAATAIYGSRGANGVIQIVTKRGKTG-KPVVAYNGYYGLQENTKRIAVMDPYNF 249

Query: 288  RRLIDE------------EGIAYTDYGG--NTDWVDEMTRNPISQNHNLSFSGGDRKTNF 333
             +L +E            EG     Y G   TD+ D++ +    QNH+LS  GG  +T +
Sbjct: 250  VKLANELDPVGTAQGYFIEGRTLESYQGLQGTDYQDQLFKIAPYQNHSLSLRGGADQTKY 309

Query: 334  TASLNYRNWQGIFLRSNQERFNIRADLNHSMFDDKLRANFQIINRVFTREEGGADGYAYR 393
            + S NY++ +GI + S   R   R  L+H++   K++A    +N  +T+  GG  G +  
Sbjct: 310  SLSTNYQDQEGIIINSGFSRIQSRFTLDHNV-SKKVKAGIN-VNYSYTQSYGGPIGSSNF 367

Query: 394  QAIIRN---------------PTDQVRTEDGGWQERDGY--FYENPISRIYEADSESKFK 436
             A I                 P D  +  D G    + Y  +  NPI  +    + +K  
Sbjct: 368  SASINTLYSIWGYRPITGSLLPIDD-QLYDPGLPAVNVYSDYRANPILDLKNRINNNKSN 426

Query: 437  EMRVNGSLNYNPIDNLDIK----LMVSNVQNSNLTGYATSFQHTNTRLNNQNGTASRSTS 492
             +  N  + Y  I  L +K    + ++N + +   G  T+     T     NG+   +T 
Sbjct: 427  NLDANAYVEYEIIKGLKLKSTGGISIANARVNAFYGSNTALGGPYT-AQKVNGSIYNNTG 485

Query: 493  A--YNENLLEFTTNYNKAVGDHYFTLLGGYSWQDATYEDFNASNWDFPTDLYKWNNLGAG 550
            +   NEN L +    N A   H    + G+S Q A       S  + P +    + L   
Sbjct: 486  STWLNENTLTYAKKINNA---HNLNAVIGFSNQFAKTGSAGFSATNVPNESLGLDALDLS 542

Query: 551  GALQAGQAGMGSSKNKWQLAGFFGRATYSYHEKYLFMASVRREGSSRFGENSQWGTFPAV 610
             ++ A      S  + W +  FF R +Y Y   YLF AS R +GSSRF    +WG FPAV
Sbjct: 543  TSIVA-----RSVNSTWGMQSFFTRVSYDYKSTYLFTASYRADGSSRFAPGEKWGYFPAV 597

Query: 611  SVGWRISNEPFLKNSKNIGEIKLRAGFGVTGT--IANSPYLSQISYDFTRAQGAYIGGQW 668
            S  W+I NE FLK++K + + K+R  +G TG   +++  YLSQ+++   ++         
Sbjct: 598  SAAWKIKNESFLKDAKILSDAKIRTSYGETGNNRVSDFAYLSQLAFPLNQSYSFNNNPPE 657

Query: 669  VQGFIPARNFNPDLRWERKEEYNFGVDYSFFNDRLSGSIDVYRRDIKDLLYNFPVPVPPY 728
            +   I     N  L+WE   + N G+D  F   R+  + D+YR+   DLL N  +P    
Sbjct: 658  LSAMIGTFG-NEGLKWETSRQTNIGIDLGFLKQRMLLTADIYRKKTSDLLLNAQLPYTTG 716

Query: 729  LTNSMTINAGVLQNDGIEVLVNVVPIQKKDFSWNTSITYSTNRNKLVSLS-NDQFEATND 787
             +N+   N G +QNDG+E+ +N V IQ K+F W T+   S N+NK+VSL+ N Q+ AT  
Sbjct: 717  ASNAFK-NVGAMQNDGLELTLNTVNIQNKNFRWTTNFNISFNKNKVVSLAENQQYLATTV 775

Query: 788  FFTAGYTGEPIQDYTHRVEVGGAIGR----FYVWKTVGTTEDGEWLIENQAGENIPISE- 842
             F   Y+  P         VG   G      Y +       +G + +++    NIP +  
Sbjct: 776  GFDTRYSNIPPYISVLGQSVGQLYGHIFDGIYQYSDFDKMPNGAYALKS----NIPTNSN 831

Query: 843  --------------------ASQEDRQYYGNGIPLHILGFNNSLRFKNFDMQANFRGAFG 882
                                 +++DR   G G+PLH+ GF+N+  +KNFD+   F+ ++G
Sbjct: 832  ARANIKPGDIKFKDINGDGVVNEQDRTIIGRGLPLHVGGFSNNFTYKNFDLNVFFQWSYG 891

Query: 883  HEILNFQRMFYE--NPYNPAYNMLKTAYD--------PVYGNRLNSDLALVSHYIEDGDY 932
            + ++N  R+ +E     NP  N   T  D          Y           S+ +EDG Y
Sbjct: 892  NNLINANRLMFEGSTSNNPFLNQFATYIDRWSPTNPSNTYYRAGGGINTYSSNVVEDGSY 951

Query: 933  FKLDNLTIGYTIPKLGF----LRNARVYASGLNLFTITKYKGIDPE-----GVSITGFDP 983
             +L  +++GY   K       L + RVYAS  NLFT+T Y G DPE      V   GFD 
Sbjct: 952  LRLKTVSLGYNFSKKLLDKIKLSSLRVYASAQNLFTMTNYSGPDPEVSTRNSVLTPGFD- 1010

Query: 984  GNDQRDKYPTTRTYTLGLNVTF 1005
                   YP  RT   GLN +F
Sbjct: 1011 ----FSAYPRPRTIVFGLNTSF 1028