Pairwise Alignments

Query, 1005 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1111 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  452 bits (1162), Expect = e-131
 Identities = 308/1001 (30%), Positives = 481/1001 (48%), Gaps = 81/1001 (8%)

Query: 58   ISGEDGLTLPGVSILIKGTTRGVTTDMDGKFSIDIPDEGATLVFSFIGFAQQEVEVYTAK 117
            I  E G TLPGV+I +K  + G T+  DG+F +    E A LV S+IG+A QE++     
Sbjct: 137  ILDEKGNTLPGVTIKVKNGSIGTTSGSDGEFILKNVPEDAILVISYIGYATQEIKADQKA 196

Query: 118  DLSITLEPEMTSMTEVVVVGYGTMRKGDVTSSIGGVKEEDFVKGAVRDAAQLVQGKVAGL 177
            D++I L P+  ++ +VVVVGYG  +K D+T ++  + ++      +    Q++QGK AG+
Sbjct: 197  DMAIKLLPKSDNLNDVVVVGYGITKKKDLTGAVSTIDKKAIENLPINRVDQMLQGKAAGV 256

Query: 178  RVTTPSGDPGASTQINLRGINSINGTSNPLILIDGVPG-DLNTVPPEDIESVDVLKDGSA 236
            +VT+ +G PG+   I +RG NSINGT+ PL +IDG+ G D+N V P+DI S+ +LKD S+
Sbjct: 257  QVTSTNGAPGSGASIRIRGGNSINGTNEPLYVIDGLIGADINAVNPQDIASMSILKDASS 316

Query: 237  AAIYGTRATGGVILITTKKNSGGNRNSINYNTYVSLQTIARKPELLTGDDYRRLIDEEGI 296
             AIYG R + GV++ITTKK + G+ N IN+  Y  +Q + ++  +L    Y  L +E  +
Sbjct: 317  TAIYGARGSNGVVIITTKKGAAGSDN-INFEAYTGVQQLPKEIAMLNATQYAELANEAAV 375

Query: 297  AY---------TDYGGNTDWVDEMTRNPISQNHNLSFSGGDRKTNFTASLNYRNWQGIFL 347
                          G  T+W  E+TR     N+ L  SGG +  N+  S NY N +GI L
Sbjct: 376  LNGTPILYPNPQSLGVGTNWQREITRTAPMSNYTLGASGGSKGFNYFLSGNYNNQEGIIL 435

Query: 348  RSNQERFNIRADLNHSMFDDKLRANFQIINRVFTREEG-GADGYAYRQAIIRNPTDQVRT 406
             S   R+  R +L+  + D+        + R  TR       G +   A   +P   V  
Sbjct: 436  NSGFSRYQFRTNLSKQLRDNVTVGAMINVGRTVTRNNTVSLGGPSQSSATAYSPIAAVYN 495

Query: 407  EDGGW---QERDGYFYENPISRIYEADSESKFKEMRVNGSLNYNPIDNLDIKLMVSNVQN 463
             DG +   +  D  +Y+NP+++     + +       N +L++  I  L  K    +   
Sbjct: 496  PDGSFTSQKPNDPLYYDNPVAQGTVPYNRTINSYFTGNLTLDWELIKGLTFKSTFGSQMT 555

Query: 464  SN-LTGYATSFQHTNTRLNN---QNGTASRSTSAYNENLLEFTTNYNKAVG-DHYFTLLG 518
             N +  Y  S   +     N    N  A+ +    NEN    T NYNK  G DH F  + 
Sbjct: 556  FNKVNRYLPSSLPSRVNSGNAGMANVDAANTIMVLNEN----TLNYNKDFGTDHNFNAVI 611

Query: 519  GYSWQDATYEDFNASNWDFPTDLYKWNNLGAGGALQAGQAGMGSSKNKWQLAGFFGRATY 578
            G S+Q  + E FNA    +  D   +NNLGAG         +GS + K+ +  +  R  Y
Sbjct: 612  GTSYQTESLERFNAEGQKYYADPLLYNNLGAG---SQATFKIGSGETKYAIFSYLARFNY 668

Query: 579  SYHEKYLFMASVRREGSSRFGENSQWGTFPAVSVGWRISNEPFLKNSKNIGEIKLRAGFG 638
            +Y  KYL   + R + SSRF  N +   FPA ++ W  SNE F+KN      +K+RA +G
Sbjct: 669  TYKNKYLLTLTGRSDASSRFAANHKRAFFPAAAIAWNASNEDFIKNLNVFDNLKIRASYG 728

Query: 639  VTGTIANSPYLSQISYDFTRAQGAYIGGQWVQGFIPARNFNPDLRWERKEEYNFGVDYSF 698
              G+     Y S  S       G  IGG  + GF   R  NPDL WE  ++++ G+++S 
Sbjct: 729  SNGSQGIDTYQSLAS--LRPVIGYLIGGTNIVGFTSDRLPNPDLTWETTKQFDAGIEFSI 786

Query: 699  FNDRLSGSIDVYRRDIKDLLYNFPVPVPPYLTNSMTINAGVLQNDGIEVLVNVVPIQKKD 758
               R++  +D Y +   +LL N  +      ++ +T N G + N G+E+ +N   I +  
Sbjct: 787  LKKRVNVELDYYNKVTSNLLLNQQLATQSGYSSKVT-NIGSINNHGLELAINTDNIVRDG 845

Query: 759  FSWNTSITYSTNRNKLVSLSNDQFEATNDFFTAGYTGEPIQDYTHRVEVGGAIGRFYVWK 818
            FSW+T++  + NRNK++ L   Q       F    TG        R+ VG  +G F+   
Sbjct: 846  FSWSTTLNIAANRNKVLDLGGVQ------AFDNASTGYGTYSTISRLIVGQPVGTFWGTT 899

Query: 819  TVGTTED----------------GEWLIENQAGENIPISEASQEDRQYYGNGIPLHILGF 862
             VGT +                 G+ L ++  G+     +    D    GN  P    G 
Sbjct: 900  YVGTKKTDTPPTGTATSPGNNRIGDALYQDLNGD----GKIDVADYHVIGNSNPKFYGGL 955

Query: 863  NNSLRFKNFDMQANFRGAFGHEILNFQRMFYENPYNPAYNMLKTAYDPVYGNRLNSDLAL 922
             N+  +K F +   F+G++G++++N    F  N  +P +N   +  D    N  +SD+  
Sbjct: 956  GNTFTYKKFSLNVFFQGSYGNQVMNISDNF-NNSSSPGFNQYASVADRWTVNNQSSDIPR 1014

Query: 923  V---------SHYIEDGDYFKLDNLTIGYTIP----KLGFLRNARVYASGLNLFTITKYK 969
            +         S  + DG + +L   TIG+ +      + +++   VY +G NL+  TKY 
Sbjct: 1015 LPKTLDYIYSSRSVYDGSFLRLRTATIGFNLTGSDMHVKWIQKLNVYVTGTNLWLWTKYP 1074

Query: 970  GIDPE------GVSITGFDPGNDQRDKYPTTRTYTLGLNVT 1004
              DPE        ++ GFD        YP  RT+ LGLN+T
Sbjct: 1075 YYDPEVNSYGTNSTLRGFD-----YTDYPQNRTFILGLNLT 1110