Pairwise Alignments

Query, 1005 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1049 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  466 bits (1198), Expect = e-135
 Identities = 327/1042 (31%), Positives = 508/1042 (48%), Gaps = 105/1042 (10%)

Query: 53   VTGTVISGEDGLTLPGVSILIKGTTRGVTTDMDGKFSIDIPD-EGATLVFSFIGFAQQEV 111
            V GTV     G+ L GVS+ +KGT  G +TD DG ++I +   E +TLVFS++G+ Q+E+
Sbjct: 24   VEGTVTEQGSGIALVGVSVSVKGTKTGASTDKDGHYAIQVSTKEKSTLVFSYVGYLQREM 83

Query: 112  EVYTAKDLSITLEPEMTSMTEVVVVGYGTMRKGDVTSSIGGVKEEDFVKGAVRDAAQLVQ 171
             V     ++++L  +  ++ +VVVVGYGT +KGD+ SS+G V   D  K  VR   + + 
Sbjct: 84   PVGDKGVINLSLASDEKALGDVVVVGYGTSKKGDLVSSVGQVDMNDMAKAPVRSIDESLA 143

Query: 172  GKVAGLRVTTPSGDPGASTQINLRGINSINGTSNPLILIDGVPGD---LNTVPPEDIESV 228
            G+VAG++V +  G PG+S  I +RG NSI   ++PL ++DG P +   LN   P+++ES+
Sbjct: 144  GRVAGVQVNSSDGQPGSSVNIVIRGANSITQNNSPLYVVDGFPIEGFNLNVFDPQEVESI 203

Query: 229  DVLKDGSAAAIYGTRATGGVILITTKKNSGGNRNSINYNTYVSLQTIARKPELLTGDDYR 288
            DVLKD SA AIYG R   GVI+ITTKK   G    I+++  VS     +  EL+   D+ 
Sbjct: 204  DVLKDASATAIYGARGANGVIMITTKKGKMG-APVISFSPTVSFDNNIKTMELMNSYDFA 262

Query: 289  R---------------------LIDEEGIAYTDYGGN--TDWVDEMTRNPISQNHNLSFS 325
            +                     L+   G    DY     TDW     +  + Q+++L+  
Sbjct: 263  KMQLELVPGAPGSANDPTPIYILLTRPGKTLEDYRNAPATDWQSPFFQTGLRQDYSLALR 322

Query: 326  GGDRKTNFTASLNYRNWQGIFLRSNQERFNIRADLNHSMFDD---KLRANFQIINRVFTR 382
            GG  KT +  S N  + +G  + +  +R+  R  L+ ++       + AN+  + R    
Sbjct: 323  GGTDKTIYALSGNLNDQKGTIINTAYKRYQGRITLDQTLSKKIKVGVNANYAYLLRSGNS 382

Query: 383  EEGGADGYAYRQAIIR----NPTDQVRTEDGGWQER--DGYFYE-NPISRIYEADSESKF 435
               G  G      +      +P  ++ TED    E    G  Y+ NPI         +K 
Sbjct: 383  AAQGTGGSGTTNILYSVWGYSPLSEL-TEDEAIDETTASGVDYKFNPIMNQNNLLRNNKT 441

Query: 436  KEMRVNGSLNYNPIDNLDIKLM-------VSNVQNSNLTGYATSFQHTNTRLNNQNGT-A 487
              + V+G  +Y   DNL +K+        V + + +N   Y  S   T  R +  NG+ A
Sbjct: 442  HNLNVSGYFDYAITDNLKLKITGGINNTRVISEEFNNSKTYPGSPNTTPGRTSGVNGSIA 501

Query: 488  SRSTSAY-NENLLEFTTNYNKAVGDHYFTLLGGYSWQDATYEDFNASNWDFPTDLYKWNN 546
              +T+ + NEN L +T  YNK+   H   +LGG+S Q  T   F       P +    + 
Sbjct: 502  EANTNNWSNENTLTWTKTYNKS---HNLNILGGFSTQGNTSNAFGFGATFLPNEKLGLSG 558

Query: 547  LGAGGALQAGQAGMGSSKNKWQLAGFFGRATYSYHEKYLFMASVRREGSSRFGENSQWGT 606
            L  G       A    + + W L+ FFGR  Y++  KY   AS R +GSS+F + ++W  
Sbjct: 559  LNEGILNPVTIA----TSSLWTLSSFFGRIKYNFKSKYYLEASYRADGSSKFADGNKWSY 614

Query: 607  FPAVSVGWRISNEPFLKNSKNIGEIKLRAGFGVTGTIANSPYLSQISYDFTRAQGAYIGG 666
            FP++   WR   E FLKNSK + E KLRA FG TG    + +    S D           
Sbjct: 615  FPSIGGSWRFIKEDFLKNSKVLSEGKLRASFGKTGNNRVNDFAYLSSNDVVPGNSYPWNN 674

Query: 667  QWVQGFIPARNFNPDLRWERKEEYNFGVDYSFFNDRLSGSIDVYRRDIKDLLYNFPVPVP 726
             +V   IP    NP ++WE  ++Y+ GVD  F  +R+S + DVY+++ KDLL    +P  
Sbjct: 675  SYVSSIIPTSLGNPKVKWETTDQYDAGVDLGFLKNRISLTADVYKKNTKDLLLRATLPTS 734

Query: 727  PYLTNSMTINAGVLQNDGIEVLVNVVPIQKKDFSWNTSITYSTNRNKLVSLSNDQ---FE 783
               T++   N G + N G+E+ ++ + I  K+F WN+S   S NRNK+++L+ DQ     
Sbjct: 735  SGYTSAFK-NVGAVANRGLEISLSTINISNKNFQWNSSFNISFNRNKVLALAEDQQTLLS 793

Query: 784  ATNDFFTAGYTGEPIQDYTHRVEVGGAIGRFY--VWKTV------GTTEDGEWLIEN--- 832
             TN  +   YT  P    ++  ++G  +G  Y  +W  V        T  GE+L+++   
Sbjct: 794  TTN--WDNAYTNIP----SYIAKIGEPLGLMYGFIWDGVYQYSDFNRTSTGEYLLKDNVP 847

Query: 833  ---QAGENIPISE-----------ASQEDRQYYGNGIPLHILGFNNSLRFKNFDMQANFR 878
                A +NI   +            +  D    GN +PLH  GF+N+  +K FD+   F+
Sbjct: 848  ANGSARQNIQPGDIRYRDLNGDGNVNASDYAVIGNSLPLHTGGFSNNFTYKQFDLNVFFQ 907

Query: 879  GAFGHEILNFQRMFYE-NPYNPAYNMLKTAYDPVYG--NRLNSD--------LALVSHYI 927
             ++G++I N  R  +E N     +    ++Y   +   N+ +S+            S  I
Sbjct: 908  WSYGNDIQNINRQVFEGNALGKRFLQQYSSYTDRWSPENQASSNYRTGGFSVAGYSSRTI 967

Query: 928  EDGDYFKLDNLTIGYTIPKLGF----LRNARVYASGLNLFTITKYKGIDPEGVSITGFDP 983
            EDG + +L  +++GY IPK       ++ AR++ SG NL+T TKY G+DPE  + +    
Sbjct: 968  EDGSFLRLKTVSLGYNIPKPLLDRVKIKTARIFVSGQNLYTWTKYTGLDPEVSTYSSVLT 1027

Query: 984  GNDQRDKYPTTRTYTLGLNVTF 1005
            G      YP  RT   G NVTF
Sbjct: 1028 GGFDYSAYPRARTIAFGANVTF 1049