Pairwise Alignments

Query, 1005 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1012 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  541 bits (1393), Expect = e-157
 Identities = 341/1002 (34%), Positives = 528/1002 (52%), Gaps = 73/1002 (7%)

Query: 53   VTGTVISGEDGLTLPGVSILIKGTTRGVTTDMDGKFSIDIPDEGATLVFSFIGFAQQEVE 112
            +TG +I  E+   + G S+ +KGT++   T  +G FSI     G  LVF+F+G+  +E+ 
Sbjct: 35   ITGNLIDTENKPVI-GASVSVKGTSKVTVTGDNGAFSIPAKS-GDKLVFTFMGYEPKEIT 92

Query: 113  VYTAKDLSITLEPEMTSMTEVVVVGYGTMRKGDVTSSIGGVKEEDFVKGAVRDAAQLVQG 172
            +  A    +TL+    S+T+VVVVGYG   +  ++S+I  VK E+  KGA+ D  QL+QG
Sbjct: 93   IGAASSYKVTLKEATASLTDVVVVGYGKSSRKTLSSAITSVKPEELNKGAIADVGQLLQG 152

Query: 173  KVAGLRVTTPSGDPGASTQINLRGINSINGTSNPLILIDGVPG-DLNTVPPEDIESVDVL 231
            KVAG+ +T+ SGDP     + LRG +++N    P  +IDG+PG D+  + P DIES+DVL
Sbjct: 153  KVAGMNITS-SGDPNKPAAVILRGASTVNSPGAPFYVIDGIPGADIAAIAPADIESIDVL 211

Query: 232  KDGSAAAIYGTRATGGVILITTKKNSGGNRNSINYNTYVSLQTIARKPELLTGDDYRRLI 291
            KD +A AIYG RA  GVI++TTK+   G +  +NY+ Y + + ++ + +L++ D  R  +
Sbjct: 212  KDAAATAIYGNRAASGVIMVTTKRGKSG-KPQLNYSGYAAAEKVSSQLDLMSADQLRSFL 270

Query: 292  DEEGIAYT---DYGGNTDWVDEMTRNP-ISQNHNLSFSGGDRKTNFTASLNYRNWQGIFL 347
                +A++   D G N +W+  + R+   SQNHNLSFSGG   +N++ASLNY   +GI  
Sbjct: 271  TTNKVAFSPNDDKGENVNWMKAIERSTAFSQNHNLSFSGGAEHSNYSASLNYFTKEGILA 330

Query: 348  RSNQERFNIRADLNHSMFDDKLRANFQIINRVFTREEGGADGYAYRQAIIRNPTDQVRTE 407
            +S+ +R   R +++   F+DK++ +  + N                QA  R P   +   
Sbjct: 331  KSSLDRIIGRLNVDQYAFNDKVKFSLNLSNSSSKSINEPLQNIVLLQAAKRLPVSPIYNA 390

Query: 408  DGGWQER---DGYFYENPISRIYEADSESKFKEMRVNGSLNYNPIDNLDIKLMVSNVQNS 464
            DG + E     GYF  NPI+    A  E+K+  + + G        N ++KL      N 
Sbjct: 391  DGSYFENLNNTGYF--NPIAISDNAQDETKYNVL-LGGF-------NTEVKLPFGFTYNI 440

Query: 465  NLTGYATSFQH------------TNTRLNNQ-----------------NGTASRSTSAYN 495
            NL    T+  H            T+   NN                  NG+A RS     
Sbjct: 441  NLYYQKTTASHGEFYSSYFGKYPTSNFYNNPDPGIGIAHTLIGGLFGTNGSALRSNYENT 500

Query: 496  ENLLEFTTNYNKAVGDHYFTLLGGYSWQDATYED-FNASNWDFPTDLYKWNNLGAGG--A 552
               LE    ++K +GDH    + GY++QD  Y D F  S+ +FPTD   ++NL  G   A
Sbjct: 501  NKTLETFLTWDKKIGDHTINAVLGYTYQDNVYGDGFQTSSTNFPTDYIGFSNLSLGNPYA 560

Query: 553  LQAGQAGMGS--SKNKWQLAGFFGRATYSYHEKYLFMASVRREGSSRFGENSQWGTFPAV 610
            + + +  +G+  +  +  +   F R  Y+Y  KYLF  S+RR+GSS FG+N+QWG FP+ 
Sbjct: 561  ISSYRINLGNDLTYGRILMISDFLRVNYNYKNKYLFQGSIRRDGSSVFGKNNQWGYFPSA 620

Query: 611  SVGWRISNEPFLKNSKNIGEIKLRAGFGVTGTIAN-SPYLSQISYDFTRAQGAYIGGQWV 669
             + WR+S E F+K    I ++KLR  +GVTG  +    Y  Q+ Y  +     Y  G   
Sbjct: 621  GLAWRVSEEEFMKGQSVISDLKLRLSYGVTGNSSGIGAYTGQLIYGISGTY--YNNGVQA 678

Query: 670  QGFIPARNFNPDLRWERKEEYNFGVDYSFFNDRLSGSIDVYRRDIKDLLYNFPVPVPPYL 729
              + P +  NPDL+WER    N G+D+  FN++++GS+DVY ++  D+L+ + VP     
Sbjct: 679  AAYAPIQGSNPDLKWERTATKNIGLDFGLFNNKVTGSVDVYDKNTTDMLFKYNVPASLVP 738

Query: 730  TNSMTINAGVLQNDGIEVLVNVVPIQKKDFSWNTSITYSTNRNKLVSL----SNDQFEAT 785
              ++  N G + N GIEV +   P+  K FSW ++I  + N+NK+ SL    +N      
Sbjct: 739  GGAIWANGGSINNKGIEVSLTTSPVTTKSFSWLSTINMAYNKNKITSLQGPYANGDSVRY 798

Query: 786  NDFFTAGYTGEPIQDYTHRVEVGGAIGRFYVWKTVGTTEDGEWLIENQAGENIPISEASQ 845
            +D    G T   +Q     ++VG  +G+F+  K  G   +G  L   + G +   +    
Sbjct: 799  SDPEGPGQTNATLQ----ILKVGYPLGQFFSLKYAGKDSNGNSLFYKRDG-STTTTPGIG 853

Query: 846  EDRQYYGNGIPLHILGFNNSLRFKNFDMQANFRGAFGHEILNFQRMFYENPYNPAY-NML 904
             D  Y G+  P  ++G++N+ ++K+ ++    RG FG++I N  R            N+L
Sbjct: 854  TDYFYLGSAQPKVLMGWSNTFKYKDLELNIFLRGTFGNKIFNATRADLSYTAGATVNNIL 913

Query: 905  KTAYDPVYGNRLNSDLALVSHYIEDGDYFKLDNLTIGYTIPK-LGFLRNARVYASGLNLF 963
             +A D    +  NS  +    YIE+G Y +LDN T+GY     + ++ N R+Y S  NLF
Sbjct: 914  NSAADDKITDTRNSFYS--DRYIENGSYVRLDNATLGYNFKNPVKYVNNIRLYLSTNNLF 971

Query: 964  TITKYKGIDPEGVSITGFDPGNDQRDKYPTTRTYTLGLNVTF 1005
            TIT YKGIDPE ++  G  PG D  + YP TRT+ LGLN +F
Sbjct: 972  TITGYKGIDPE-INQGGVAPGIDYNNFYPKTRTFLLGLNASF 1012