Pairwise Alignments

Query, 1005 a.a., TonB-linked outer membrane protein, SusC/RagA family from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 1043 a.a., SusC/RagA family TonB-linked outer membrane protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  414 bits (1064), Expect = e-119
 Identities = 318/1049 (30%), Positives = 496/1049 (47%), Gaps = 132/1049 (12%)

Query: 53   VTGTVISGEDGLTLPGVSILIKGTTRGVTTDMDGKFSIDIPDEGATLVFSFIGFAQQEVE 112
            +TGTV S E  + +PGV I    + +   TD  GKFSI+  +    + FS++G+  ++V 
Sbjct: 27   ITGTV-SDEKNMPIPGVGIKNISSGKTAVTDEAGKFSIEA-NPNDVIRFSYVGYQNKDVT 84

Query: 113  VYTAKDLSITLEP-EMTSMTEVVVVGYGTMRKGDVTSSIGGVKEEDFVKGAVRDAAQLVQ 171
            V    ++S+ + P E   + EVVV+GYG+++K D+T S+G VK  +  +       Q + 
Sbjct: 85   VGNEANISVKMVPAEANKLDEVVVIGYGSVKKTDLTGSVGVVKASELQERPSSSLNQALA 144

Query: 172  GKVAGLRVTTPSGDPGASTQINLRGINSINGTSNPLILIDGVP----------GDLNTVP 221
            G+++G++V T SG PG  T I +RG +SIN ++NPL ++DGV             ++ + 
Sbjct: 145  GRISGVQVNTNSGRPGGQTNIKIRGFSSINTSNNPLYVVDGVALPVGSQTQNSNAIDYIN 204

Query: 222  PEDIESVDVLKDGSAAAIYGTRATGGVILITTKKNSGGNRNSINYNTYVSLQTIA-RKPE 280
            P DI SV+VLKD S+ AIYG R   GVILITTKK S  N   I Y+    + T+A    +
Sbjct: 205  PSDIASVEVLKDASSTAIYGARGANGVILITTKKGSA-NAQRITYDADFGVNTLAAHHVK 263

Query: 281  LLTGDDYRRL----------IDEEGIAYTDYGG-----------------------NTDW 307
            +L   +Y ++           D  G A  +Y                         NTDW
Sbjct: 264  MLDAFEYVKVQDLAYENIKVYDPVGWAAGNYASTPVPKASRIALPQFFDGNGNPLYNTDW 323

Query: 308  VDEMTRNPISQNHNLSFSGGDRKTNFTASLNYRNWQGIFLRSNQERFNIRADLNHSMFDD 367
            + E T+N +SQNH L F+GG+  + +     YR+ QG+ L S  +R++ R +     FD 
Sbjct: 324  LKESTQNKLSQNHQLGFTGGNENSTYGVFAGYRDDQGLLLNSYLKRYSGRFN-----FDS 378

Query: 368  KLR------ANFQIINRVFTREEGGADGY-AYRQAIIRNPTDQVRTEDGGWQERDGYFY- 419
            K++       N    N+     + G  G  + R      P   ++  DG W +     + 
Sbjct: 379  KIKPWLKVGGNLSYNNQDENIVDQGTGGLNSVRMITEAFPFLPIKLADGKWGDNKLIPWA 438

Query: 420  ---ENPISRIYEADSESKFKEMRVNGSLNYNPIDNLDIKLMV---SNVQNSNLTGYATSF 473
                NP+  +   D +         GS+      N D++      +NV + N+  Y    
Sbjct: 439  EGGSNPVHIL--TDQKYGMITQTALGSIYSTISFNKDLEFRTQLGANVVSRNINEYNAKQ 496

Query: 474  QHTNTRLNNQNGTASRSTSAYNENLLEFTTNYNKAVGD-HYFTLLGGYSWQDATYEDFNA 532
             +  +  + QNGTA+ +        LE    YNK   + H    L G SWQ  ++    +
Sbjct: 497  LYGIS--DGQNGTANVTNDRETFWSLENYLTYNKRFAESHAINALLGISWQATSFFSNTS 554

Query: 533  SNWDFPTDLYKWNNLGAGGALQAGQAGMGSSKNKWQLAGFFGRATYSYHEKYLFMASVRR 592
               +F TD Y  NN+G+G         +GSS+N+     +FGR  Y++ +KYL   + R 
Sbjct: 555  HAENFVTDFYGNNNMGSGSK----SITVGSSRNRSAFNSYFGRLNYAFKDKYLVTFTGRV 610

Query: 593  EGSSRFGENSQWGTFPAVSVGWRISNEPFLKNSKNIGEIKLRAGFGVTGTIANSPYLSQI 652
            +GSS+FGEN ++  FP+ ++ W+ S+E FLK +K I  +KLR  +G++G   NS   +  
Sbjct: 611  DGSSKFGENHKFAFFPSAALAWKASDEDFLKGNKTISNLKLRTSYGLSG---NSELPAYQ 667

Query: 653  SYDFTRAQGAYIGGQWVQGFIPARNFNPDLRWERKEEYNFGVDYSFFNDRLSGSIDVYRR 712
            S        A I    V G    R  NPDL WE+  + + G++   FN+R++   D+Y R
Sbjct: 668  SLATLVNNSAIINDGKVTGIGIGRLANPDLVWEKTAQVDAGLELGLFNNRINLEADLYYR 727

Query: 713  DIKDLLYNFPVPVPPYLTNSMTI---NAGVLQNDGIEVLVNVVPIQKKDFSWNTSITYST 769
               D+L + PVP     T   ++   N G +QN G+++ +N V IQ  DF+W TS   S 
Sbjct: 728  KTTDMLLDAPVP----RTTGYSVIRKNIGSMQNKGLDLGINTVNIQTDDFTWKTSFNISL 783

Query: 770  NRNKLVSLS--NDQFEATNDFFTAGYTGEPIQDYTHRVEVGGAIGRFYVWKTVGTTEDGE 827
            NRNK++SL+  +D F   N  FT         + T  + VG  +G F+    +GT  + E
Sbjct: 784  NRNKVLSLATPDDIFGVGNPNFT---------NQTGIIRVGEPVGSFWGLVRLGTWSEAE 834

Query: 828  -----WLIENQAGENIPISE-----------ASQEDRQYYGNGIPLHILGFNNSLRFKNF 871
                   +  + G+ +   +            +  DRQ  GNG P     F NS R+KN 
Sbjct: 835  RAEAAKYVSYRGGKTLLPGDIKYLDVNGDHAITDADRQIIGNGTPKGWGSFGNSFRYKNL 894

Query: 872  DMQANFRGAFGHEILNFQRMFYENPYNPAYNMLKTAYDPVYGNRLNSDLALV-------- 923
            ++    + ++G+++LN      E+    A N   +  +       N+ +A +        
Sbjct: 895  ELIVELQYSYGNDVLNMTHHSGEDRQVQA-NSFASVLNAWTPQNQNTPIAAIRDQSAGYV 953

Query: 924  ----SHYIEDGDYFKLDNLTIGYTIPKLGF----LRNARVYASGLNLFTITKYKGIDPEG 975
                +H++EDG + +  NL +GYT  K       L   RVYAS  N F  TKY G DPE 
Sbjct: 954  TNVDTHWLEDGSFIRGKNLLLGYTFDKTLVEKLRLSKLRVYASVQNFFLATKYTGNDPEV 1013

Query: 976  VSI-TGFDPGNDQRDKYPTTRTYTLGLNV 1003
             +    F  G    D YP   T+ +GLN+
Sbjct: 1014 TTYGNAFAQGQTFFD-YPKPTTFMVGLNI 1041