Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 363 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 42/168 (25%), Positives = 88/168 (52%), Gaps = 3/168 (1%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           N+GI L +  ++ EAL  +N  L  TP +   L +R  VL  +G+L  A+E ++  L  D
Sbjct: 35  NRGILLERLNRWTEALASYNCALEITPQRQEALNNRAIVLEHLGRLPEAVESYEQALAID 94

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124
           +   +  ++R +VL  L R E+A++   +A+ L  +    +++  F   + G    A+  
Sbjct: 95  RQQPEVWNNRGIVLRKLGRLEDAIASYQQAIALAAHYAQAWANCGFALWQQGRYREAVRH 154

Query: 125 YEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKE 172
           YE+++ +DP+ + ++   G +   +   +++ +  D+A   +  QP++
Sbjct: 155 YEQSVAIDPDQSSAWRQLGQIYLSVDQPDQALRCLDQA---IALQPQQ 199



 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 37/119 (31%), Positives = 63/119 (52%)

Query: 50  LELALEDFDLLLKTDQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRA 109
           LE  L  +D  L+ +  N    ++R ++L  L R  EAL+  + AL + P      ++RA
Sbjct: 12  LEALLAAYDFRLRHEPRNCTLWNNRGILLERLNRWTEALASYNCALEITPQRQEALNNRA 71

Query: 110 FLKDRIGDLEGAIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGY 168
            + + +G L  A+  YE+A+ +D +    +NN+GIV  KLG  E +  S+ +A  L  +
Sbjct: 72  IVLEHLGRLPEAVESYEQALAIDRQQPEVWNNRGIVLRKLGRLEDAIASYQQAIALAAH 130



 Score = 60.5 bits (145), Expect = 5e-14
 Identities = 37/146 (25%), Positives = 75/146 (51%)

Query: 17  EEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAV 76
           E  L  ++  L + P    +  +RG +L R+ +   AL  ++  L+      + +++RA+
Sbjct: 13  EALLAAYDFRLRHEPRNCTLWNNRGILLERLNRWTEALASYNCALEITPQRQEALNNRAI 72

Query: 77  VLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDA 136
           VL  L R  EA+   ++AL +D   P  +++R  +  ++G LE AIA Y++AI +    A
Sbjct: 73  VLEHLGRLPEAVESYEQALAIDRQQPEVWNNRGIVLRKLGRLEDAIASYQQAIALAAHYA 132

Query: 137 VSYNNKGIVEEKLGYKERSKKSFDKA 162
            ++ N G    + G    + + ++++
Sbjct: 133 QAWANCGFALWQQGRYREAVRHYEQS 158



 Score = 56.2 bits (134), Expect = 9e-13
 Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 1/166 (0%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           N+ I L   G+  EA+E + Q LA    QP +  +RG VL ++G+LE A+  +   +   
Sbjct: 69  NRAIVLEHLGRLPEAVESYEQALAIDRQQPEVWNNRGIVLRKLGRLEDAIASYQQAIALA 128

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124
            + A   ++    L    R  EA+   ++++ +DP+    +     +   +   + A+  
Sbjct: 129 AHYAQAWANCGFALWQQGRYREAVRHYEQSVAIDPDQSSAWRQLGQIYLSVDQPDQALRC 188

Query: 125 YEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQP 170
            ++AI + P+ A ++  +G     LG    +  S++ A+ L+G +P
Sbjct: 189 LDQAIALQPQQATAWTWRGHALYNLGQYAAALTSYENAE-LLGDRP 233



 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 37/133 (27%), Positives = 70/133 (52%), Gaps = 6/133 (4%)

Query: 6   QGISLYKEGKFEEALEVFN--QLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLK- 62
           +G +LY  G++  AL  +   +LL + P   ++ + RG  L+++ + E AL  +  +L  
Sbjct: 206 RGHALYNLGQYAAALTSYENAELLGDRPL--LLSIQRGHTLAQLERYEEALASYAAILPQ 263

Query: 63  -TDQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGA 121
            T +  A+    + +V   L+    AL+  D+A+  +P+    + +RA L  R+     A
Sbjct: 264 LTGEAAAEVAYYQGLVWAYLQDWTAALAAFDQAIAGNPDLAEAWYNRAALHARLDQPVAA 323

Query: 122 IADYEKAIEMDPE 134
           IAD ++AI +DP+
Sbjct: 324 IADLQQAIALDPD 336



 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 26/91 (28%), Positives = 48/91 (52%)

Query: 85  EEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDAVSYNNKGI 144
           E  L+  D  L  +P N   +++R  L +R+     A+A Y  A+E+ P+   + NN+ I
Sbjct: 13  EALLAAYDFRLRHEPRNCTLWNNRGILLERLNRWTEALASYNCALEITPQRQEALNNRAI 72

Query: 145 VEEKLGYKERSKKSFDKADKLVGYQPKEYKS 175
           V E LG    + +S+++A  +   QP+ + +
Sbjct: 73  VLEHLGRLPEAVESYEQALAIDRQQPEVWNN 103