Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 255 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 58.9 bits (141), Expect = 9e-14
 Identities = 33/99 (33%), Positives = 55/99 (55%)

Query: 67  NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126
           NA   S+R  V       EEA+++ + ++ L PN P  Y +R    + + + + AIADY+
Sbjct: 58  NAALWSNRGNVRVSQNHLEEAIADYNESVRLAPNAPDPYLNRGTAWEGLQEWDKAIADYQ 117

Query: 127 KAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKL 165
           +A++  P DA ++NN G V   LG  E++   F+ A +L
Sbjct: 118 QALQFSPGDAAAHNNLGNVRLSLGEYEQALSEFETASRL 156



 Score = 45.1 bits (105), Expect = 1e-09
 Identities = 32/157 (20%), Positives = 75/157 (47%), Gaps = 3/157 (1%)

Query: 14  GKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISD 73
           G+F  A +++++ +A  P+   +  +RG V      LE A+ D++  ++      D   +
Sbjct: 39  GEFGRAEQLWSEAIALAPDNAALWSNRGNVRVSQNHLEEAIADYNESVRLAPNAPDPYLN 98

Query: 74  RAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDP 133
           R      L+  ++A+++  +AL   P +   +++   ++  +G+ E A++++E A  + P
Sbjct: 99  RGTAWEGLQEWDKAIADYQQALQFSPGDAAAHNNLGNVRLSLGEYEQALSEFETASRLAP 158

Query: 134 EDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQP 170
             A +  N  +   +L   +R+  +  +   LV   P
Sbjct: 159 GFAFAGANVALTLFQL---DRTSDAIQRMRSLVRKYP 192



 Score = 37.7 bits (86), Expect = 2e-07
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           N+G     +   EEA+  +N+ +   PN P   L+RG     + + + A+ D+   L+  
Sbjct: 64  NRGNVRVSQNHLEEAIADYNESVRLAPNAPDPYLNRGTAWEGLQEWDKAIADYQQALQFS 123

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRA---FLKDRIGD 117
             +A   ++   V   L   E+ALSE + A  L P   +  ++ A   F  DR  D
Sbjct: 124 PGDAAAHNNLGNVRLSLGEYEQALSEFETASRLAPGFAFAGANVALTLFQLDRTSD 179