Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 923 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 1/140 (0%)

Query: 3   DINQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLK 62
           D  Q I+ Y+ G+FE A+   ++LL + P+    L  +G       + E  +      + 
Sbjct: 10  DYQQAIAAYQAGEFEAAIAQLDRLLGDVPDWAAALGLQGLCYYCCDQKETGITLLRRAIA 69

Query: 63  TDQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAI 122
            D  +    ++   +L       EAL  L +AL +DP +     +RA    ++GD   A+
Sbjct: 70  LDPTDPTHFNNLGNLLQRQGHLTEALERLTQALAIDPTHVAARFNRAITLQKLGDPATAL 129

Query: 123 ADYEKAIEMDPED-AVSYNN 141
            DY++ +E DP++  + YN+
Sbjct: 130 QDYQQLLEADPDNPEIRYNS 149



 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 2/122 (1%)

Query: 6   QGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQ 65
           QG+  Y   + E  + +  + +A  P  P    + G +L R G L  ALE     L  D 
Sbjct: 47  QGLCYYCCDQKETGITLLRRAIALDPTDPTHFNNLGNLLQRQGHLTEALERLTQALAIDP 106

Query: 66  YNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNP-YRYSSRAFLKDRIGDLEGAIAD 124
            +     +RA+ L  L     AL +  + L  DP+NP  RY+S A     IGD +  +  
Sbjct: 107 THVAARFNRAITLQKLGDPATALQDYQQLLEADPDNPEIRYNS-AHAALAIGDWDFGLPA 165

Query: 125 YE 126
           YE
Sbjct: 166 YE 167



 Score = 42.0 bits (97), Expect = 4e-08
 Identities = 30/125 (24%), Positives = 55/125 (44%)

Query: 22  VFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAVVLHLL 81
           +  Q +A  P +P      GR L + G    A +   +  +     A+F  +R+ + +  
Sbjct: 488 LIRQAVAIAPEEPSFHRALGRSLKQQGDYAGAAQALAIACELAPTQAEFWHERSSLEYYD 547

Query: 82  KRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDAVSYNN 141
            +   AL+ L++A+ L         SR  L  R+G    + ADY+ A  + PE  +   N
Sbjct: 548 NQLTAALNSLNQAIALQGATADHLISRGVLHYRLGQFPESCADYDAAAAIAPESPLLRCN 607

Query: 142 KGIVE 146
           +G ++
Sbjct: 608 RGFLQ 612



 Score = 28.9 bits (63), Expect = 4e-04
 Identities = 19/78 (24%), Positives = 34/78 (43%)

Query: 74  RAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDP 133
           +A+  +     E A+++LDR L   P+       +          E  I    +AI +DP
Sbjct: 13  QAIAAYQAGEFEAAIAQLDRLLGDVPDWAAALGLQGLCYYCCDQKETGITLLRRAIALDP 72

Query: 134 EDAVSYNNKGIVEEKLGY 151
            D   +NN G + ++ G+
Sbjct: 73  TDPTHFNNLGNLLQRQGH 90



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 11/38 (28%), Positives = 22/38 (57%)

Query: 4   INQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRG 41
           I++G+  Y+ G+F E+   ++   A  P  P++  +RG
Sbjct: 572 ISRGVLHYRLGQFPESCADYDAAAAIAPESPLLRCNRG 609