Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 75.9 bits (185), Expect = 8e-19
 Identities = 44/157 (28%), Positives = 78/157 (49%)

Query: 17  EEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAV 76
           EE +   + ++A+ P+ P     RG    R G+   A+ DFD  ++ +       ++RA+
Sbjct: 61  EENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRAL 120

Query: 77  VLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDA 136
           V   L   + AL++ + AL ++PN    Y  R  L  +   L+ A  D+ KAIE+D  D 
Sbjct: 121 VQRNLGNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADP 180

Query: 137 VSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEY 173
            +Y+N+G++ +      ++ + F KA  L    P+ Y
Sbjct: 181 RAYHNRGLIYQARNQHAQAIEDFSKAISLSPSSPEPY 217



 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 37/149 (24%), Positives = 77/149 (51%)

Query: 14  GKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISD 73
           G  + AL  +N  L   PN  +  + RG +  +  +L+ A  DF+  ++ D  +     +
Sbjct: 126 GNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADPRAYHN 185

Query: 74  RAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDP 133
           R ++     ++ +A+ +  +A++L P++P  Y+ R       GD + A +D+  AI ++ 
Sbjct: 186 RGLIYQARNQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAINLNG 245

Query: 134 EDAVSYNNKGIVEEKLGYKERSKKSFDKA 162
           + A S+ N+ ++ E+ G K ++ KS+  A
Sbjct: 246 KLAESWANQALIYERRGDKAKAAKSYSHA 274



 Score = 57.0 bits (136), Expect = 4e-13
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 2/163 (1%)

Query: 6   QGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD- 64
           +G +  + G+F  A+  F+Q +   P       +R  V   +G  + AL D++  L+ + 
Sbjct: 84  RGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALVQRNLGNQQAALADYNAALQINP 143

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124
            Y+  +I  R  +     + + A ++ ++A+ LD  +P  Y +R  +         AI D
Sbjct: 144 NYDVAYIG-RGNLYRQANQLDAAFNDFNKAIELDTADPRAYHNRGLIYQARNQHAQAIED 202

Query: 125 YEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVG 167
           + KAI + P     YN +GI     G  + +   F+ A  L G
Sbjct: 203 FSKAISLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAINLNG 245



 Score = 49.3 bits (116), Expect = 8e-11
 Identities = 26/101 (25%), Positives = 56/101 (55%), Gaps = 6/101 (5%)

Query: 62  KTDQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGA 121
           +TD+  + F  +RA      + +EE ++ L   +  +P++P  Y+ R     R G+   A
Sbjct: 44  QTDKPESMFRVERA------QGSEENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRA 97

Query: 122 IADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKA 162
           +AD+++AI+++P    +Y N+ +V+  LG ++ +   ++ A
Sbjct: 98  VADFDQAIQLNPRFYQAYANRALVQRNLGNQQAALADYNAA 138



 Score = 32.7 bits (73), Expect = 8e-06
 Identities = 21/95 (22%), Positives = 44/95 (46%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           N+G+      +  +A+E F++ ++ +P+ P     RG      G  + A  DF+  +  +
Sbjct: 185 NRGLIYQARNQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAINLN 244

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDP 99
              A+  +++A++        +A      AL+LDP
Sbjct: 245 GKLAESWANQALIYERRGDKAKAAKSYSHALSLDP 279



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 110 FLKDRIGDLEGAIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQ 169
           F  +R    E  IA     I  +P D   YN +G    + G   R+   FD+A +L    
Sbjct: 52  FRVERAQGSEENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQL---N 108

Query: 170 PKEYKS 175
           P+ Y++
Sbjct: 109 PRFYQA 114