Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 784 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 40.8 bits (94), Expect = 8e-08
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 15/141 (10%)

Query: 6   QGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELAL-EDFDLLLKTD 64
           QG     E    +A   F+ L A TP          R    +G++ LAL E  D LL  D
Sbjct: 59  QGAIALAENDASQARAAFDHLAATTPAD-------ARGWHGLGRVHLALGEPADALLALD 111

Query: 65  QYN-------ADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGD 117
           +         A    DRA+ L  L R +EAL+ L+RAL   P +    + +A + +R   
Sbjct: 112 RATERAQAPLAGLAHDRALALRQLGRFDEALATLERALEHSPGDCALLTQKARVLERARR 171

Query: 118 LEGAIADYEKAIEMDPEDAVS 138
              A     + +   P+DA +
Sbjct: 172 PRDAAEVAGQVLARHPDDATA 192



 Score = 34.3 bits (77), Expect = 8e-06
 Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 7/146 (4%)

Query: 19  ALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAVVL 78
           ALE     LA  P+ P +L  +G +         A   FD L  T   +A        V 
Sbjct: 38  ALEACRNALALAPDHPDLLAAQGAIALAENDASQARAAFDHLAATTPADARGWHGLGRVH 97

Query: 79  HLLKRNEEALSELDRALNLDPNNPYRYS-SRAFLKDRIGDLEGAIADYEKAIEMDPEDAV 137
             L    +AL  LDRA           +  RA    ++G  + A+A  E+A+E  P D  
Sbjct: 98  LALGEPADALLALDRATERAQAPLAGLAHDRALALRQLGRFDEALATLERALEHSPGDC- 156

Query: 138 SYNNKGIVEEKLGYKERSKKSFDKAD 163
                 ++ +K    ER+++  D A+
Sbjct: 157 -----ALLTQKARVLERARRPRDAAE 177



 Score = 32.0 bits (71), Expect = 4e-05
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           ++ ++L + G+F+EAL    + L ++P    +L  + RVL R  +   A E    +L   
Sbjct: 127 DRALALRQLGRFDEALATLERALEHSPGDCALLTQKARVLERARRPRDAAEVAGQVLARH 186

Query: 65  QYNADFISDRAVVLHLLKRNEEALSE----LDRAL 95
             +A   +  A  L  L R  EAL+     LDR L
Sbjct: 187 PDDATAQAVLADALLTLGRPGEALAPARALLDRLL 221



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 28  ANTPNQPIILLHR-GRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAVVLHLLKRNEE 86
           A TP   +  L R GR L  +G+  + +ED   +      + D +S  A  L        
Sbjct: 226 AATPEALLDALERVGRCLRVLGRHGVWVEDSRRVCARLPDHPDALSALATALWWSGDFPG 285

Query: 87  ALSELDRALNLDPNNP 102
           AL  L RAL LDP++P
Sbjct: 286 ALVPLRRALVLDPSHP 301