Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 49.7 bits (117), Expect = 4e-11
 Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 31/179 (17%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           + G  L    K+ EALE ++++L+  P+  + +  +G V  ++ + E AL+ F+ +L  +
Sbjct: 12  SHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMN 71

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124
                 I ++  V   LK+ E               N  ++S       + G+ E +++ 
Sbjct: 72  PSYIPAIKNKKQVEEKLKKQES-------------ENYNKFSKLGVENYKQGNFEKSLSY 118

Query: 125 YEKAIEMDPEDA------------------VSYNNKGIVEEKLGYKERSKKSFDKADKL 165
           +EKA E++P                     + +NNKG+   K+   +++ + F+KA KL
Sbjct: 119 FEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKL 177



 Score = 33.1 bits (74), Expect = 4e-06
 Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 86  EALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDAVSYNNKGIV 145
           EAL   D+ L+  P++      +  +  ++ + E A+  +   + M+P    +  NK  V
Sbjct: 25  EALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYIPAIKNKKQV 84

Query: 146 EEKLGYKERSKKSFDKADKLVGYQPKEYKSTNAPK 180
           EEKL  K++  ++++K  KL     + YK  N  K
Sbjct: 85  EEKL--KKQESENYNKFSKL---GVENYKQGNFEK 114



 Score = 32.3 bits (72), Expect = 7e-06
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 17/130 (13%)

Query: 41  GRVLSRMGKLELALEDFDLLLKTDQYNADFIS--DRAVVLHLLKRNEEALSELDRALNLD 98
           G +L    K   ALE +D +L    Y  DF++   + +V   LK  E+AL   +  LN++
Sbjct: 14  GALLCNSEKYAEALECYDKILS--YYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMN 71

Query: 99  PNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKS 158
           P+      ++  ++             EK  + + E+   ++  G+   K G  E+S   
Sbjct: 72  PSYIPAIKNKKQVE-------------EKLKKQESENYNKFSKLGVENYKQGNFEKSLSY 118

Query: 159 FDKADKLVGY 168
           F+KA ++  Y
Sbjct: 119 FEKAFEINPY 128