Pairwise Alignments
Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526
Subject, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Score = 51.2 bits (121), Expect = 3e-11
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 3/172 (1%)
Query: 4 INQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKT 63
+ G Y GK+++++E FN+ L + P P +G +GK +LA + ++ L
Sbjct: 16 LETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSI 75
Query: 64 DQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIA 123
+ + I ++L+ L+ +E++ L D + A+LK G AI
Sbjct: 76 RPNDLEIIKSYTMLLNSLELFKESVEILKNVSESD-DKIIEILGDAYLK--TGKFNEAIL 132
Query: 124 DYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEYKS 175
Y +E P KG L + + + ++K K+ Y + +K+
Sbjct: 133 QYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKN 184
Score = 48.9 bits (115), Expect = 1e-10
Identities = 33/124 (26%), Positives = 57/124 (45%)
Query: 7 GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66
G + K GKF EA+ +N +L P IL +G L + K + ALE ++ +LK Y
Sbjct: 118 GDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPY 177
Query: 67 NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126
+ + + + +K+ E+A+ D LN + S+ ++G A+ Y
Sbjct: 178 DTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYT 237
Query: 127 KAIE 130
K +E
Sbjct: 238 KVLE 241
Score = 39.7 bits (91), Expect = 9e-08
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 3/170 (1%)
Query: 5 NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
N G + Y K+E+A++ ++ L + L +G L ++GK AL+ + +L+
Sbjct: 184 NIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKH 243
Query: 65 QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124
N + ++ + + E A+ L+ A +P NP ++ + +
Sbjct: 244 IQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEF 303
Query: 125 YEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEYK 174
EKA++ D E A ++ KG + L ER ++ D K + + K
Sbjct: 304 MEKALDKDSEYAKAWCYKGYI---LNLLERHYEAIDCYKKAISINKNDSK 350
Score = 39.3 bits (90), Expect = 1e-07
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 7 GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66
G+ Y +E A+ P P IL+ GR ++ LE + L D
Sbjct: 254 GLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSE 313
Query: 67 NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126
A + +L+LL+R+ EA+ +A++++ N+ + + + IG + + YE
Sbjct: 314 YAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYE 373
Query: 127 KAIEMD 132
A+ ++
Sbjct: 374 NAVNLE 379
Score = 38.5 bits (88), Expect = 2e-07
Identities = 32/128 (25%), Positives = 54/128 (42%)
Query: 6 QGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQ 65
+G +L KF+EALE++ ++L +P + + G + K E A++ +D+ L +
Sbjct: 151 KGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHK 210
Query: 66 YNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADY 125
+ + L L + EAL + L N + L D E AI
Sbjct: 211 GDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYL 270
Query: 126 EKAIEMDP 133
E A E +P
Sbjct: 271 ELANERNP 278
Score = 35.4 bits (80), Expect = 2e-06
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 22/151 (14%)
Query: 34 PIILLHRGRVLSRMGKLELALEDFDLLLKTDQYNADFISDRAVVLHLLKRNEEALSELDR 93
P LL G GK + ++E F+ L ++ N D + H+L +++ A ++
Sbjct: 12 PKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEK 71
Query: 94 ALNLDPNN-------PYRYSSRAFLKDRIGDLEGAIADYEKAIEM----------DPEDA 136
AL++ PN+ +S K+ + L+ +K IE+ E
Sbjct: 72 ALSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAI 131
Query: 137 VSYNNKGIVEEKLGYKERSKKSFDKADKLVG 167
+ YNN I+E K YKE K K LVG
Sbjct: 132 LQYNN--ILERKPRYKEILAK---KGTALVG 157