Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 41/158 (25%), Positives = 82/158 (51%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           ++G+ LY +G + +++  +N  L   P    I +++G  L ++G    + E FD  L  D
Sbjct: 30  DKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLID 89

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124
             N++  +    VL      ++AL   D++LN+D  N   + ++    + +     AI  
Sbjct: 90  PENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDC 149

Query: 125 YEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKA 162
           ++K+I ++ +++  + NKG  + KLG  E+S  S++KA
Sbjct: 150 FDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKA 187



 Score = 68.9 bits (167), Expect = 1e-16
 Identities = 43/162 (26%), Positives = 84/162 (51%)

Query: 4   INQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKT 63
           +N+G SL K G + E+ E F++ L   P         G VLS+ G  + ALE +D  L  
Sbjct: 63  VNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNI 122

Query: 64  DQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIA 123
           D  N++   ++ + L+ ++R  EA+   D++++++  N   + ++   + ++G+ E +I 
Sbjct: 123 DSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSID 182

Query: 124 DYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKL 165
            Y KA+ +D +   +   KG    KL   E + + F+ A+ +
Sbjct: 183 SYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETI 224



 Score = 60.8 bits (146), Expect = 3e-14
 Identities = 37/144 (25%), Positives = 68/144 (47%)

Query: 4   INQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKT 63
           + +G S  K   +E A+E FN      P       ++          E AL+ +D  L+ 
Sbjct: 199 LGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEYALKYYDEALEI 258

Query: 64  DQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIA 123
           +  N+D +  + + L  +K    A+S  D A+ LDP N   +  +      + D E +I+
Sbjct: 259 NPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSIS 318

Query: 124 DYEKAIEMDPEDAVSYNNKGIVEE 147
            Y+KA+E++P++  +  N  I+E+
Sbjct: 319 CYKKALEIEPKNENAKENIDIIEK 342



 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 21/185 (11%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           N+G + +K G++E++++ +N+ L         LL +G    ++   E A+E F+     +
Sbjct: 166 NKGETQFKLGEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETIN 225

Query: 65  Q-------YNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGD 117
                   Y AD   D        +  E AL   D AL ++P+N     S+    D++ +
Sbjct: 226 PKSEYPPYYKADAYRDT-------ENFEYALKYYDEALEINPSNSDILISKGICLDKMKN 278

Query: 118 LEGAIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEYKSTN 177
              AI++++ AI++DP++   +  KG     L   E S   + KA ++      E K+ N
Sbjct: 279 YSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKDYESSISCYKKALEI------EPKNEN 332

Query: 178 APKEN 182
           A KEN
Sbjct: 333 A-KEN 336



 Score = 36.2 bits (82), Expect = 9e-07
 Identities = 25/121 (20%), Positives = 59/121 (48%), Gaps = 5/121 (4%)

Query: 62  KTDQYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGA 121
           K+  YN     D+ + L+      +++SE + AL  +P +   + ++     ++G    +
Sbjct: 24  KSKSYN-----DKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGES 78

Query: 122 IADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEYKSTNAPKE 181
              ++KA+ +DPE++ ++N  G V  K G  +++ + +DK+  +     + +K+      
Sbjct: 79  TECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNKGITLN 138

Query: 182 N 182
           N
Sbjct: 139 N 139