Pairwise Alignments

Query, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

Subject, 393 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis JJ

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 3/169 (1%)

Query: 7   GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66
           G   Y  GK+++++E FN+ L + P  P     +G     +GK +LA + ++  L     
Sbjct: 19  GTEYYNNGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYQMLGKSKLAQDSYEKALSIRPN 78

Query: 67  NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126
           + + I    ++L+ L+  +E++  L      D +        A+LK   G  E AI  Y 
Sbjct: 79  DLEIIKSYTMLLNSLELFKESVEILKNVSESD-DEIIEILGDAYLK--TGKFEEAILHYN 135

Query: 127 KAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEYKS 175
             +E  P        KG     L   + + + ++K  K+  Y  + +K+
Sbjct: 136 DILERKPRYKEILAKKGTALVGLKQFDEALEIYEKVLKISPYDTEVWKN 184



 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 33/124 (26%), Positives = 58/124 (46%)

Query: 7   GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66
           G +  K GKFEEA+  +N +L   P    IL  +G  L  + + + ALE ++ +LK   Y
Sbjct: 118 GDAYLKTGKFEEAILHYNDILERKPRYKEILAKKGTALVGLKQFDEALEIYEKVLKISPY 177

Query: 67  NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126
           + +   +     + +K+ E+A+   D  LN    +     S+     ++G    A+  Y 
Sbjct: 178 DTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYT 237

Query: 127 KAIE 130
           K +E
Sbjct: 238 KVLE 241



 Score = 39.7 bits (91), Expect = 9e-08
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 3/170 (1%)

Query: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64
           N G + Y   K+E+A++ ++  L        + L +G  L ++GK   AL+ +  +L+  
Sbjct: 184 NIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKH 243

Query: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124
             N +      ++ +  +  E A+  L+ A   +P NP           ++ +    +  
Sbjct: 244 IQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEF 303

Query: 125 YEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEYK 174
            EKA++ D E A ++  KG +   L   ER  ++ D   K +     + K
Sbjct: 304 MEKALDKDSEYAKAWCYKGYI---LNLLERHYEAIDCYKKAISINKNDSK 350



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 28/126 (22%), Positives = 55/126 (43%)

Query: 7   GISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQY 66
           G+  Y    +E A+          P  P IL+  GR   ++      LE  +  L  D  
Sbjct: 254 GLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSE 313

Query: 67  NADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADYE 126
            A     +  +L+LL+R+ EA+    +A++++ N+   +   + +   IG  + +   YE
Sbjct: 314 YAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYE 373

Query: 127 KAIEMD 132
            A+ ++
Sbjct: 374 NAVNLE 379



 Score = 37.0 bits (84), Expect = 6e-07
 Identities = 31/128 (24%), Positives = 54/128 (42%)

Query: 6   QGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTDQ 65
           +G +L    +F+EALE++ ++L  +P    +  + G     + K E A++ +D+ L   +
Sbjct: 151 KGTALVGLKQFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHK 210

Query: 66  YNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIADY 125
            +      +   L  L +  EAL    + L     N   +     L     D E AI   
Sbjct: 211 GDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYL 270

Query: 126 EKAIEMDP 133
           E A E +P
Sbjct: 271 ELANERNP 278